Mp1g02190



Description

Annotation

Database ID Description
Gene3D G3DSA:3.30.60.90 -
ProSiteProfiles PS51293 SANT domain profile.
SMART SM00717 sant
ProSiteProfiles PS50090 Myb-like domain profile.
SUPERFAMILY SSF46689 Homeodomain-like
ProSiteProfiles PS50135 Zinc finger ZZ-type profile.
CDD cd02335 ZZ_ADA2
Gene3D G3DSA:1.10.10.60 -
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00291 zz_5
ProSitePatterns PS01357 Zinc finger ZZ-type signature.
PANTHER PTHR12374 TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED
SUPERFAMILY SSF57850 RING/U-box
Pfam PF00569 Zinc finger, ZZ type
Gene3D G3DSA:1.10.10.10 -
FunFam G3DSA:3.30.60.90:FF:000008 Transcriptional adapter 2
ProSiteProfiles PS50934 SWIRM domain profile.
Pfam PF00249 Myb-like DNA-binding domain
CDD cd00167 SANT
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
PIRSF PIRSF025024 Txn_adaptor_ADA2
FunFam G3DSA:1.10.10.10:FF:000087 Transcriptional adapter 2
KEGG K11314 transcriptional adapter 2-alpha
KOG KOG0457 Histone acetyltransferase complex SAGA/ADA, subunit ADA2; [B]
MapolyID Mapoly0029s0028 -
GO GO:0005634 nucleus
GO GO:0006357 regulation of transcription by RNA polymerase II
GO GO:0006338 chromatin remodeling
GO GO:0003713 transcription coactivator activity
GO GO:0035065 obsolete regulation of histone acetylation
GO GO:0005515 protein binding
GO GO:0008270 zinc ion binding
GO GO:0003682 chromatin binding

Nomenclature

Gene symbol Product Transcript ID Status
Mp1R-MYB10 transcription factor, MYB Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp1g02190.1 chr1:2365756..2374868 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g02190 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g02190 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.