Mp1g03340



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF52402 Adenine nucleotide alpha hydrolases-like
Gene3D G3DSA:3.40.50.620 HUPs
ProSiteProfiles PS50011 Protein kinase domain profile.
Pfam PF00069 Protein kinase domain
CDD cd00293 USP_Like
FunFam G3DSA:3.30.200.20:FF:000389 Receptor-like cytosolic serine/threonine-protein kinase RBK1
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
Pfam PF00582 Universal stress protein family
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
FunFam G3DSA:1.10.510.10:FF:000335 receptor-like cytosolic serine/threonine-protein kinase RBK2
PANTHER PTHR47987 OS08G0249100 PROTEIN
SMART SM00220 serkin_6
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
KOG KOG1187 Serine/threonine protein kinase; [T]
MapolyID Mapoly0005s0273 -
GO GO:0006468 protein phosphorylation
GO GO:0004672 protein kinase activity
GO GO:0005524 ATP binding

Nomenclature

Gene symbol Product Transcript ID Status
MpRLK-Pelle_RLCK-Vib Receptor-like Kinase (RLK) Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp1g03340.1 chr1:3704562..3710930 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g03340 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g03340 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.