Mp1g06010



Description

Annotation

Database ID Description
ProSiteProfiles PS51886 TLDc domain profile.
SMART SM00584 109ultra
Pfam PF07534 TLD
KOG KOG2372 Oxidation resistance protein; N-term missing; C-term missing; [L]
MapolyID Mapoly0005s0008 -

Nomenclature

Gene symbol Product Transcript ID Status
MpOXR5 abiotic stress protein Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp1g06010.1 chr1:6362360..6364214 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g06010 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g06010 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.