Mp1g06290



Description

Annotation

Database ID Description
ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site.
SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases
Coils Coil Coil
ProSiteProfiles PS51679 C-5 cytosine-specific DNA methylase (Dnmt) domain profile.
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00145 C-5 cytosine-specific DNA methylase
Gene3D G3DSA:3.40.50.150 Vaccinia Virus protein VP39
PANTHER PTHR23068 DNA CYTOSINE-5- -METHYLTRANSFERASE 3-RELATED
Pfam PF11926 Domain of unknown function (DUF3444)
KOG KOG0919 C-5 cytosine-specific DNA methylase; [K]
MapolyID Mapoly0043s0021 -
GO GO:0008168 methyltransferase activity
GO GO:0005634 nucleus

Nomenclature

Gene symbol Product Transcript ID Status
MpDNMT3a C-5 cytosine-specific DNA methylase Published

Transcript models

Transcript ID Location Sequences Extract region
Mp1g06290.1 chr1:6797127..6805975 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g06290 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g06290 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.