Mp1g07850



Description

Annotation

Database ID Description
Gene3D G3DSA:3.30.300.30 -
SUPERFAMILY SSF56801 Acetyl-CoA synthetase-like
Pfam PF13193 AMP-binding enzyme C-terminal domain
Gene3D G3DSA:3.40.50.12780 -
PANTHER PTHR43201 ACYL-COA SYNTHETASE
CDD cd05941 MCS
Pfam PF00501 AMP-binding enzyme
ProSitePatterns PS00455 Putative AMP-binding domain signature.
KEGG K18660 malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
KOG KOG1176 Acyl-CoA synthetase; [I]
MapolyID Mapoly0036s0029 -
GO GO:0031956 medium-chain fatty acid-CoA ligase activity
GO GO:0006631 fatty acid metabolic process

Nomenclature

Gene symbol Product Transcript ID Status
MpACOS16 Acyl-CoA synthase, Secondary metabolism enzyme Provisional
This is a provisional entry. If you want to update the entry, please contact the administrator.

Transcript models

Transcript ID Location Sequences Extract region
Mp1g07850.1 chr1:8464459..8470989 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g07850 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g07850 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.