Mp1g08660



Description

Annotation

Database ID Description
ProSiteProfiles PS50016 Zinc finger PHD-type profile.
CDD cd06008 NF-X1-zinc-finger
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF01422 NF-X1 type zinc finger
SMART SM00438 znfxneu3
PANTHER PTHR12360 NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1
ProSiteProfiles PS51061 R3H domain profile.
CDD cd16492 RING-CH-C4HC3_NFX1-like
ProSiteProfiles PS50089 Zinc finger RING-type profile.
SUPERFAMILY SSF82708 R3H domain
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
KEGG K12236 transcriptional repressor NF-X1
KOG KOG1952 Transcription factor NF-X1, contains NFX-type Zn2+-binding and R3H domains; [K]
MapolyID Mapoly0036s0109 -
GO GO:0005634 nucleus
GO GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0003676 nucleic acid binding
GO GO:0008270 zinc ion binding
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific

Nomenclature

Gene symbol Product Transcript ID Status
MpNFX1-1 transcription factor, NF-X1 Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g08660.1 chr1:9118464..9125380 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.