Mp1g13820



Description

Annotation

Database ID Description
SUPERFAMILY SSF63829 Calcium-dependent phosphotriesterase
Pfam PF20067 Strictosidine synthase-like, N-terminal
Gene3D G3DSA:2.120.10.30 -
Pfam PF03088 Strictosidine synthase
PANTHER PTHR10426 STRICTOSIDINE SYNTHASE-RELATED
KOG KOG1520 Predicted alkaloid synthase/Surface mucin Hemomucin; [R]
MapolyID Mapoly0019s0152 -
GO GO:0009058 biosynthetic process
GO GO:0016844 strictosidine synthase activity
GO GO:0016787 hydrolase activity
GO GO:0012505 endomembrane system

Nomenclature

Gene symbol Product Transcript ID Status
MpMpSTR1 Secondary metabolism enzyme, Terpene biosynthesis enzymes Provisional
This is a provisional entry. If you want to update the entry, please contact the administrator.

Transcript models

Transcript ID Location Sequences Extract region
Mp1g13820.1 chr1:14144750..14148742 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g13820 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g13820 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.