Mp1g14510



Description

Annotation

Database ID Description
PANTHER PTHR22624 CYSTEINE PROTEASE ATG4
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF03416 Peptidase family C54
SUPERFAMILY SSF54001 Cysteine proteinases
KEGG K08342 cysteine protease ATG4 [EC:3.4.22.-]
KOG KOG2674 Cysteine protease required for autophagy - Apg4p/Aut2p; [ZU]
MapolyID Mapoly0153s0038 -
GO GO:0019786 protein-phosphatidylethanolamide deconjugating activity

Nomenclature

Gene symbol Product Transcript ID Status
MpATG4 Autophagy protein Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp1g14510.1 chr1:15198401..15202439 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g14510 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g14510 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.