Mp1g16410



Description

Annotation

Database ID Description
CDD cd02247 cupin_pirin_C
CDD cd02909 cupin_pirin_N
Gene3D G3DSA:2.60.120.10 Jelly Rolls
SUPERFAMILY SSF51182 RmlC-like cupins
PANTHER PTHR13903 PIRIN-RELATED
Pfam PF05726 Pirin C-terminal cupin domain
Pfam PF02678 Pirin
FunFam G3DSA:2.60.120.10:FF:000055 pirin
KEGG K06911 quercetin 2,3-dioxygenase [EC:1.13.11.24]
MapolyID Mapoly0033s0019 -

Nomenclature

Gene symbol Product Transcript ID Status
MpCupin1 Cupin Provisional
This is a provisional entry. If you want to update the entry, please contact the administrator.

Transcript models

Transcript ID Location Sequences Extract region
Mp1g16410.1 chr1:17099311..17104180 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g16410 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g16410 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.