Mp1g17220



Description

Annotation

Database ID Description
SMART SM00397 tSNARE_6
Gene3D G3DSA:1.20.5.110 -
ProSiteProfiles PS50192 t-SNARE coiled-coil homology domain profile.
PANTHER PTHR19957 SYNTAXIN
Pfam PF05739 SNARE domain
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF58038 SNARE fusion complex
CDD cd15841 SNARE_Qc
Coils Coil Coil
KEGG K08506 syntaxin of plants SYP7
KOG KOG3065 SNAP-25 (synaptosome-associated protein) component of SNARE complex; N-term missing; [U]
MapolyID Mapoly0001s0062 -
GO GO:0000149 SNARE binding
GO GO:0012505 endomembrane system
GO GO:0031201 SNARE complex
GO GO:0006886 intracellular protein transport
GO GO:0048278 vesicle docking
GO GO:0016021 membrane
GO GO:0005484 SNAP receptor activity
GO GO:0006906 vesicle fusion

Nomenclature

Gene symbol Product Transcript ID Status
MpSYP7B.1 Ortholog of Arabidopsis SYP7 genes Published
MpSYP7B.2 Ortholog of Arabidopsis SYP7 genes Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g17220.1 chr1:18042398..18049097 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g17220.2 chr1:18042398..18049097 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.