Mp1g22180



Description

Annotation

Database ID Description
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain
ProSiteProfiles PS51375 Pentatricopeptide (PPR) repeat profile.
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF17177 Pentacotripeptide-repeat region of PRORP
Pfam PF01535 PPR repeat
NCBIfam TIGR00756 pentatricopeptide repeat
PANTHER PTHR47932 ATPASE EXPRESSION PROTEIN 3
SUPERFAMILY SSF81901 HCP-like
SUPERFAMILY SSF48452 TPR-like
Pfam PF13041 PPR repeat family
Pfam PF13812 Pentatricopeptide repeat domain
Coils Coil Coil
KOG KOG4422 Uncharacterized conserved protein; C-term missing; [S]
KOG KOG4422 Uncharacterized conserved protein; N-term missing; C-term missing; [S]
MapolyID Mapoly0001s0556 -
GO GO:0005515 protein binding

Nomenclature

Gene symbol Product Transcript ID Status
MpPPR_4 Pentatricopeptide repeat proteins Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g22180.1 chr1:23207033..23214184 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g22180.2 chr1:23207033..23213975 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.