Mp1g25080



Description

Annotation

Database ID Description
SMART SM00220 serkin_6
FunFam G3DSA:1.10.510.10:FF:000537 Putative receptor-like protein kinase
Pfam PF01453 D-mannose binding lectin
CDD cd00028 B_lectin
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
PIRSF PIRSF000641 SRK
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR47976 G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5
SMART SM00108 blect_4
CDD cd14066 STKc_IRAK
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
FunFam G3DSA:3.30.200.20:FF:000178 serine/threonine-protein kinase PBS1-like
ProSiteProfiles PS50011 Protein kinase domain profile.
Pfam PF00954 S-locus glycoprotein domain
SUPERFAMILY SSF51110 alpha-D-mannose-specific plant lectins
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
Gene3D G3DSA:2.90.10.10 -
ProSiteProfiles PS50927 Bulb-type lectin domain profile.
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
Pfam PF00069 Protein kinase domain
KOG KOG1187 Serine/threonine protein kinase; [T]
MapolyID Mapoly0061s0017 -
GO GO:0048544 recognition of pollen
GO GO:0005524 ATP binding
GO GO:0004672 protein kinase activity
GO GO:0004674 protein serine/threonine kinase activity
GO GO:0006468 protein phosphorylation

Nomenclature

Gene symbol Product Transcript ID Status
MpRLK-Pelle_SD-2b1 Receptor-like Kinase (RLK) Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp1g25080.1 chr1:26364310..26367123 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g25080 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g25080 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.