Mp1g27830



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
FunFam G3DSA:3.30.460.10:FF:000025 probable GTP diphosphokinase CRSH, chloroplastic
ProSiteProfiles PS50222 EF-hand calcium-binding domain profile.
Gene3D G3DSA:1.10.3210.10 Hypothetical protein af1432
PANTHER PTHR21262 GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain
ProSitePatterns PS00018 EF-hand calcium-binding domain.
Pfam PF13499 EF-hand domain pair
SUPERFAMILY SSF47473 EF-hand
SUPERFAMILY SSF81901 HCP-like
CDD cd05399 NT_Rel-Spo_like
Pfam PF13432 Tetratricopeptide repeat
SMART SM00386 hat_new_1
CDD cd00051 EFh
Gene3D G3DSA:1.10.238.10 -
ProSiteProfiles PS51831 HD domain profile.
SMART SM00054 efh_1
SUPERFAMILY SSF109604 HD-domain/PDEase-like
SUPERFAMILY SSF81301 Nucleotidyltransferase
Pfam PF13328 HD domain
SMART SM00954 RelA_SpoT_2
SMART SM00028 tpr_5
Gene3D G3DSA:3.30.460.10 Beta Polymerase, domain 2
Pfam PF04607 Region found in RelA / SpoT proteins
KOG KOG1157 Predicted guanosine polyphosphate pyrophosphohydrolase/synthase; [T]
KOG KOG0495 HAT repeat protein; N-term missing; C-term missing; [A]
KOG KOG4162 Predicted calmodulin-binding protein; N-term missing; [T]
MapolyID Mapoly0002s0095 -
GO GO:0005509 calcium ion binding
GO GO:0006396 RNA processing
GO GO:0005515 protein binding
GO GO:0015969 guanosine tetraphosphate metabolic process

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

UVB-induced DEG, probable chloroplastic GTP diphosphokinase (annotation).

0 core 1 peripheral

Clayton, W. A., et al. (2018) · Plant Journal  research experimental background
UVB-induced DEG, probable chloroplastic GTP diphosphokinase (annotation).

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g27830.1 chr1:28865211..28873281 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.