Mp2g03820



Description

Annotation

Database ID Description
Gene3D G3DSA:1.25.10.10 -
PANTHER PTHR46087 PUTATIVE, EXPRESSED-RELATED
Pfam PF21052 EFR3, armadillo repeat
SUPERFAMILY SSF48371 ARM repeat
KEGG K21842 protein EFR3
KOG KOG1877 Putative transmembrane protein cmp44E; [R]
MapolyID Mapoly0031s0038 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSRI4-like Provisional
This is a provisional entry. If you want to update the entry, please contact the administrator.

Transcript models

Transcript ID Location Sequences Extract region
Mp2g03820.1 chr2:4464802..4475340 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g03820.2 chr2:4464802..4475205 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g03820 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g03820 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.