Mp2g04380



Description

Annotation

Database ID Description
CDD cd08195 DHQS
PANTHER PTHR43622 3-DEHYDROQUINATE SYNTHASE
Pfam PF01761 3-dehydroquinate synthase
Hamap MF_00110 3-dehydroquinate synthase [aroB].
NCBIfam TIGR01357 3-dehydroquinate synthase
Gene3D G3DSA:1.20.1090.10 -
Gene3D G3DSA:3.40.50.1970 -
FunFam G3DSA:3.40.50.1970:FF:000001 3-dehydroquinate synthase
FunFam G3DSA:1.20.1090.10:FF:000002 3-dehydroquinate synthase
SUPERFAMILY SSF56796 Dehydroquinate synthase-like
KEGG K01735 3-dehydroquinate synthase [EC:4.2.3.4]
KOG KOG0692 Pentafunctional AROM protein; C-term missing; [E]
MapolyID Mapoly0031s0094 -
GO GO:0003856 3-dehydroquinate synthase activity
GO GO:0005737 cytoplasm
GO GO:0009073 aromatic amino acid family biosynthetic process

Nomenclature

Gene symbol Product Transcript ID Status
Mp3DHQ2 Secondary metabolism enzyme Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp2g04380.1 chr2:5042742..5046723 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g04380 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g04380 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.