Mp2g07980



Description

Annotation

Database ID Description
CDD cd00643 HMG-CoA_reductase_classI
SUPERFAMILY SSF55035 NAD-binding domain of HMG-CoA reductase
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:3.30.70.420 -
ProSitePatterns PS01192 Hydroxymethylglutaryl-coenzyme A reductases signature 3.
ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2.
PANTHER PTHR10572 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE
Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase
Gene3D G3DSA:1.10.3270.10 -
PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature
Gene3D G3DSA:3.90.770.10 -
NCBIfam TIGR00533 hydroxymethylglutaryl-CoA reductase (NADPH)
FunFam G3DSA:3.90.770.10:FF:000001 3-hydroxy-3-methylglutaryl coenzyme A reductase
FunFam G3DSA:3.30.70.420:FF:000001 3-hydroxy-3-methylglutaryl coenzyme A reductase
ProSitePatterns PS00066 Hydroxymethylglutaryl-coenzyme A reductases signature 1.
FunFam G3DSA:1.10.3270.10:FF:000002 3-hydroxy-3-methylglutaryl coenzyme A reductase
SUPERFAMILY SSF56542 Substrate-binding domain of HMG-CoA reductase
ProSiteProfiles PS50065 Hydroxymethylglutaryl-coenzyme A reductases family profile.
KEGG K00021 hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34]
KOG KOG2480 3-hydroxy-3-methylglutaryl-CoA (HMG-CoA) reductase; [I]
MapolyID Mapoly0015s0085 -
GO GO:0008299 isoprenoid biosynthetic process
GO GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity
GO GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO GO:0015936 coenzyme A metabolic process
GO GO:0005789 endoplasmic reticulum membrane
GO GO:0005515 protein binding
GO GO:0016126 sterol biosynthetic process
GO GO:0005778 peroxisomal membrane

Nomenclature

Gene symbol Product Transcript ID Status
MpHMG Secondary metabolism enzyme, Terpene biosynthesis enzymes Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp2g07980.1 chr2:9011982..9016015 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g07980 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g07980 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.