Mp2g11140



Description

Annotation

Database ID Description
SMART SM01255 KNOX1_2
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF03790 KNOX1 domain
MapolyID Mapoly0023s0081 -
GO GO:0005634 nucleus
GO GO:0003677 DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpHD7 transcription factor, HD, homeodomain protein Published
MpKNOX1b transcription factor, HD, homeodomain protein (lacks homeodomain) Published

Associated Literature (AI-based literature mining, Beta-version)

transcription factor, HD, homeodomain protein (lacks homeodomain); Genome paper KNOX1: Mapoly0175s0020 KNOX1a: Mapoly0174s0007 (lacks homeodomain) KNOX1b: Mapoly0023s0081 (lacks homeodomain) (from nomenclature)

1 core 0 peripheral

Dierschke, T., et al. (2021) · eLife  research experimental subject
Antheridia/sperm-expressed MpKNOX1 isoform lacking a homeodomain while retaining the MEINOX domain.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g11140.1 chr2:12147130..12153008 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g11140.2 chr2:12147130..12153008 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.