Mp2g22560



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
PANTHER PTHR47997 MYB DOMAIN PROTEIN 55
FunFam G3DSA:1.10.10.60:FF:000185 MYB transcription factor
CDD cd00167 SANT
ProSiteProfiles PS50090 Myb-like domain profile.
FunFam G3DSA:1.10.10.60:FF:000394 MYB transcription factor
SUPERFAMILY SSF46689 Homeodomain-like
Gene3D G3DSA:1.10.10.60 -
SMART SM00717 sant
Pfam PF00249 Myb-like DNA-binding domain
KEGG K09422 transcription factor MYB, plant
KOG KOG0048 Transcription factor, Myb superfamily; [K]
MapolyID Mapoly0072s0075 -

Nomenclature

Gene symbol Product Transcript ID Status
MpR2R3-MYB13 transcription factor, MYB Published

Associated Literature (AI-based literature mining, Beta-version)

transcription factor, MYB (from nomenclature)

0 core 1 peripheral

Clayton, W. A., et al. (2018) · Plant Journal  research experimental background
MYB13 transcript in NanoString panel, altered in rup1 (annotation).

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g22560.1 chr2:27367274..27370572 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g22560.2 chr2:27367274..27370572 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.