| Database | ID | Description |
|---|---|---|
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| SMART | SM00176 | ran_sub_2 |
| PANTHER | PTHR47977 | RAS-RELATED PROTEIN RAB |
| PRINTS | PR00449 | Transforming protein P21 ras signature |
| SMART | SM00174 | rho_sub_3 |
| SMART | SM00175 | rab_sub_5 |
| NCBIfam | TIGR00231 | small GTP-binding protein domain |
| SMART | SM00177 | arf_sub_2 |
| Pfam | PF00071 | Ras family |
| FunFam | G3DSA:3.40.50.300:FF:000359 | Small GTP-binding protein |
| ProSiteProfiles | PS51421 | small GTPase Ras family profile. |
| CDD | cd01869 | Rab1_Ypt1 |
| SMART | SM00173 | ras_sub_4 |
| Gene3D | G3DSA:3.40.50.300 | - |
| ProSiteProfiles | PS51420 | small GTPase Rho family profile. |
| ProSiteProfiles | PS51417 | small GTPase Arf family profile. |
| ProSiteProfiles | PS51419 | small GTPase Rab1 family profile. |
| KEGG | K07874 | Ras-related protein Rab-1A |
| KOG | KOG0084 | GTPase Rab1/YPT1, small G protein superfamily, and related GTP-binding proteins; [TU] |
| MapolyID | Mapoly0072s0030 | - |
| GO | GO:0003924 | GTPase activity |
| GO | GO:0016192 | vesicle-mediated transport |
| GO | GO:0005525 | GTP binding |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpRAB1A | RAB GTPase | Published |
RAB GTPase; genome paper: Mapoly0072s0030.1 (from nomenclature)
0 core 1 peripheral
Sequences: |
Gene UTR + CDS + intron |
| >Mp2g23010.1 TGCCGGCCAG ATCTCCACCG AACTATTAAC TCGTTGACTC CAAAAGAGGA GGAGCCAAAG GAAGCGAGCA GATGGGACGG AGAGAGAAGA CTTTACTTCA AACCGACGGA AAGAACGGAA GGAAAACGAT GAAAGTGGCC AACGCCCGTC GGAATAGAAC GGGCATAACC CTAAAGTGTG GGTCGCCTTG CGCAGGAGCA CGCTGGACCA AGTAACGGGT CGGGTCAGAA GGCAAGGGAA GGGAAAGGAA GGGAAGGGAC GGGACTCCAG GGAAAGGGGT CCGGAAGGAA GGAAGGAAGG GAGGGAAGGA GGGCGCAGGC GAGACTTCGG AAGCTGCGAG TGATCTGATC TTTTGTGCGA GCGCTGTTGT GTCTGGCATC GTGTCCGGTG CGTTGTTCTG CTGCTTCTGC TTGTGCTTGT TGTTGTTGTG TTGTTATTGT TGTTGCTGCT TTGCTTTCTG GGCCTGTGCT TCGCCTCACG CCTTCACTCG CGCCTCACTT GGCTTGCGTT CTTATACATT CTTTCGTCTC GTCCCATCCC ATCCCACCCC ATCCCCCGTT TTTCTGACGG TAGTGGCGCC GGGGCGGGTG TCTGGCGTTT TTGGACTGAT TGATTGATTG ATCGAGGGAT CGAGGGATCG ACTGATCGAA CACTCTGCGC GCAGACGCAC GCACGCGCGC ACGCACGCGA GCACGAAGCA AGGGAGGGGC GACCACGTCC GCGGCCACAC ATTCGAGGAA GGCGACGCAA GGCAGGCGAG AGGGAGTTGC ATAGTCGTAA GGCGGACAGG AGTGTGTAGG GATTACGGGC GGGTGCGAGT CGGAGAGCAA GGAGGGCAAG GAAGGGCAGG CAGGAGACGG AAGCGGGGTT CGAGGGAAGG GAGGGGCGCG ACGCTAGACG AGGAGAGCGA GTTGGTGGTG TGTGTTTTTG GAGCGAGCCC GAGAGGAGGG AGAGAGGGAG GGAAGCAGTT CGTCGCCGGC CAGAAGGAAG GATGAATCCC GAGTATGATT ACCTCTTCAA GCTCTTGCTC ATCGGAGACT CCGGAGTAGG AAAGTCATGT TTGCTTCTCC GGTTTGCGGA TGATTCGTAT TTGGAGAGCT ACATAAGTAC GATCGGCGTG GATTTTAAAA TTCGTACGGT GGAACTGGAT GGCAAGACTA TCAAGCTTCA GATTTGGGAT ACTGCCGGCC AAGAGCGCTT TAGGACGATC ACGAGCAGCT ACTATCGCGG GGCTCATGGA ATTATCGTTG TGTACGATGT CACAGATCAA GAGAGCTTCA ATAACGTGAA ACAGTGGTTG AATGAGATTG ACCGGTATGC AAGCGAGAAC GTGAACAAGC TGTTGGTGGG CAACAAGTCA GATCTCACCA GCAAAAAGGT AGTCGATTCA GCGACTGCTA AGGCGTTTGC CGATGAAGTG GGAATCCCCT TTTTGGAGAC CAGTGCAAAG AATGCCACGA ACGTGGAGCA GGCGTTCATG ACCATGGCAG CGGAGATCAA GAATAGGATG GCGAGCCAAC CGACCATGAA CAGCAGCAAG CCCGCGACAG TGCAAATGAA GGGCCAGCCC CTCGCCCAAA AGCAAGGCTG TTGCACATGA TCAGCTCCGA GGACAGGGGG ATCATTTGGC GCACTCTTCA TCATTCAAGT TCGTTCTTAG TGTTCAAACT TGCTCTCTGG TGCACAACGT TCATCGATTC TTCTCCTATG TTGGTCATGT ACATTCCACC ACCTTATGCA GTGGTCTTAA ATTGTGCACC TTGTCTTGGC AACGTTTGTA CCTCGACAGC ATTTGTCTTG TTAGGGTTCT AGTATAAGAT TGCACTTCCA TATACGGAAC TCTTTGGTAC TTTATTCAAT TCTTGTTTCA GCTAGGATCC TGTGAGGCTG CGTATTACAC CTGCATATAG TAGCCATTCC TTTGTATCTC AAGGCACCGC TAGCTGAAAG AATGCGAGTC CCTTAATTGG GGAACTCTTG CCACTCTCCA AGCATTTTGT CATAGGTTAT GGCTCTCCTT CAAAAGGATA CATCAGACAT AGGTATAGAA TCTGTCAGAT TACAAGGAAG GGTTTTCTTG ACCTCACTTG CATTCGATTG TGAATATAAG CACGGACTCT ATTGCATACT CGCATTTACT CTCCTTCTGC TCATTTCCCT ATCCTCTATT TCTACCCTCG CTATTCTCCT CGAGTGTTGG TGATTTCGTG TATTTCTTCT CTCCGTTTAT TTTTTCGTCC AAAGCGACCT CATTTTACAT TTAGAAATAT GAATTCTAGA TGCAAAGCTC TTGATTTGGC CCTGCTTTCC AGATTTCTCC ATAATCGAAG GTTTCAATCA TGAGTCATTG CCGAGCGCAG ACTAGTGTTG GGGCAACTTT TCCATAGCTA CTGGACCTTT CTGGTGCACA CAATTTTCTC TGTTGGTCTA TGTGGCCAGC GTTTGAGACA GACTATAATT CTTTGTTCAC CGAAAGCTGT TTTCAATTTG AGGCAGATAG GAAGGATTTA TGAAGTAAAG AAATGTTCAG AGAATACTTC TCCGTCAACT TTGGTATTTT CGCGAACAAG CACCGACT |
mRNA UTR + CDS |
| >Mp2g23010.1 TGCCGGCCAG ATCTCCACCG AACTATTAAC TCGTTGACTC CAAAAGAGGA GGAGCCAAAG GAAGCGAGCA GATGGGACGG AGAGAGAAGA CTTTACTTCA AACCGACGGA AAGAACGGAA GGAAAACGAT GAAAGTGGCC AACGCCCGTC GGAATAGAAC GGGCATAACC CTAAAGTGTG GGTCGCCTTG CGCAGGAGCA CGCTGGACCA AGTAACGGGT CGGGTCAGAA GGCAAGGGAA GGGAAAGGAA GGGAAGGGAC GGGACTCCAG GGAAAGGGGT CCGGAAGGAA GGAAGGAAGG GAGGGAAGGA GGGCGCAGGC GAGACTTCGG AAGCTGCGAG TGATCTGATC TTTTGTGCGA GCGCTGTTGT GTCTGGCATC GTGTCCGACG CACGCACGCG CGCACGCACG CGAGCACGAA GCAAGGGAGG GGCGACCACG TCCGCGGCCA CACATTCGAG GAAGGCGACG CAAGGCAGGC GAGAGGGAGT TGCATAGTCG TAAGGCGGAC AGGAGTGTGT AGGGATTACG GGCGGGTGCG AGTCGGAGAG CAAGGAGGGC AAGGAAGGGC AGGCAGGAGA CGGAAGCGGG GTTCGAGGGA AGGGAGGGGC GCGACGCTAG ACGAGGAGAG CGAGTTGGTG GTGTGTGTTT TTGGAGCGAG CCCGAGAGGA GGGAGAGAGG GAGGGAAGCA GTTCGTCGCC GGCCAGAAGG AAGGATGAAT CCCGAGTATG ATTACCTCTT CAAGCTCTTG CTCATCGGAG ACTCCGGAGT AGGAAAGTCA TGTTTGCTTC TCCGGTTTGC GGATGATTCG TATTTGGAGA GCTACATAAG TACGATCGGC GTGGATTTTA AAATTCGTAC GGTGGAACTG GATGGCAAGA CTATCAAGCT TCAGATTTGG GATACTGCCG GCCAAGAGCG CTTTAGGACG ATCACGAGCA GCTACTATCG CGGGGCTCAT GGAATTATCG TTGTGTACGA TGTCACAGAT CAAGAGAGCT TCAATAACGT GAAACAGTGG TTGAATGAGA TTGACCGGTA TGCAAGCGAG AACGTGAACA AGCTGTTGGT GGGCAACAAG TCAGATCTCA CCAGCAAAAA GGTAGTCGAT TCAGCGACTG CTAAGGCGTT TGCCGATGAA GTGGGAATCC CCTTTTTGGA GACCAGTGCA AAGAATGCCA CGAACGTGGA GCAGGCGTTC ATGACCATGG CAGCGGAGAT CAAGAATAGG ATGGCGAGCC AACCGACCAT GAACAGCAGC AAGCCCGCGA CAGTGCAAAT GAAGGGCCAG CCCCTCGCCC AAAAGCAAGG CTGTTGCACA TGATCAGCTC CGAGGACAGG GGGATCATTT GGCGCACTCT TCATCATTCA AGTTCGTTCT TAGTGTTCAA ACTTGCTCTC TGGTGCACAA CGTTCATCGA TTCTTCTCCT ATGTTGGTCA TGTACATTCC ACCACCTTAT GCAGTGGTCT TAAATTGTGC ACCTTGTCTT GGCAACGTTT GTACCTCGAC AGCATTTGTC TTGTTAGGGT TCTAGTATAA GATTGCACTT CCATATACGG AACTCTTTGG TACTTTATTC AATTCTTGTT TCAGCTAGGA TCCTGTGAGG CTGCGTATTA CACCTGCATA TAGTAGCCAT TCCTTTGTAT CTCAAGGCAC CGCTAGCTGA AAGAATGCGA GTCCCTTAAT TGGGGAACTC TTGCCACTCT CCAAGCATTT TGTCATAGGT TATGGCTCTC CTTCAAAAGG ATACATCAGA CATAGGTATA GAATCTGTCA GATTACAAGG AAGGGTTTTC TTGACCTCAC TTGCATTCGA TTGTGAATAT AAGCACGGAC TCTATTGCAT ACTCGCATTT ACTCTCCTTC TGCTCATTTC CCTATCCTCT ATTTCTACCC TCGCTATTCT CCTCGAGTGT TGGTGATTTC GTGTATTTCT TCTCTCCGTT TATTTTTTCG TCCAAAGCGA CCTCATTTTA CATTTAGAAA TATGAATTCT AGATGCAAAG CTCTTGATTT GGCCCTGCTT TCCAGATTTC TCCATAATCG AAGGTTTCAA TCATGAGTCA TTGCCGAGCG CAGACTAGTG TTGGGGCAAC TTTTCCATAG CTACTGGACC TTTCTGGTGC ACACAATTTT CTCTGTTGGT CTATGTGGCC AGCGTTTGAG ACAGACTATA ATTCTTTGTT CACCGAAAGC TGTTTTCAAT TTGAGGCAGA TAGGAAGGAT TTATGAAGTA AAGAAATGTT CAGAGAATAC TTCTCCGTCA ACTTTGGTAT TTTCGCGAAC AAGCACCGAC T |
CDS |
| >Mp2g23010.1 ATGAATCCCG AGTATGATTA CCTCTTCAAG CTCTTGCTCA TCGGAGACTC CGGAGTAGGA AAGTCATGTT TGCTTCTCCG GTTTGCGGAT GATTCGTATT TGGAGAGCTA CATAAGTACG ATCGGCGTGG ATTTTAAAAT TCGTACGGTG GAACTGGATG GCAAGACTAT CAAGCTTCAG ATTTGGGATA CTGCCGGCCA AGAGCGCTTT AGGACGATCA CGAGCAGCTA CTATCGCGGG GCTCATGGAA TTATCGTTGT GTACGATGTC ACAGATCAAG AGAGCTTCAA TAACGTGAAA CAGTGGTTGA ATGAGATTGA CCGGTATGCA AGCGAGAACG TGAACAAGCT GTTGGTGGGC AACAAGTCAG ATCTCACCAG CAAAAAGGTA GTCGATTCAG CGACTGCTAA GGCGTTTGCC GATGAAGTGG GAATCCCCTT TTTGGAGACC AGTGCAAAGA ATGCCACGAA CGTGGAGCAG GCGTTCATGA CCATGGCAGC GGAGATCAAG AATAGGATGG CGAGCCAACC GACCATGAAC AGCAGCAAGC CCGCGACAGT GCAAATGAAG GGCCAGCCCC TCGCCCAAAA GCAAGGCTGT TGCACATGA |
Protein |
| >Mp2g23010.1 MNPEYDYLFK LLLIGDSGVG KSCLLLRFAD DSYLESYIST IGVDFKIRTV ELDGKTIKLQ IWDTAGQERF RTITSSYYRG AHGIIVVYDV TDQESFNNVK QWLNEIDRYA SENVNKLLVG NKSDLTSKKV VDSATAKAFA DEVGIPFLET SAKNATNVEQ AFMTMAAEIK NRMASQPTMN SSKPATVQMK GQPLAQKQGC CT |