Mp3g05130
Description
Annotation
| Database | ID | Description |
|---|---|---|
| SUPERFAMILY | SSF48576 | Terpenoid synthases |
| Gene3D | G3DSA:1.10.600.10 | Farnesyl Diphosphate Synthase |
| Pfam | PF19086 | Terpene synthase family 2, C-terminal metal binding |
| MapolyID | Mapoly0022s0015 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpMTPSL27 | Secondary metabolism enzyme, Terpene biosynthesis enzymes | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp3g05130 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g05130.1 GGAAAACTAG CCATGAGGGT CTGAGCTTCG AGATTTCCAA CTTAGACTTA GGATTCATAA ATCCACGCTG TGCGGCAGGT TGATGTAGAT TTCTATCCAC CATCATTTTT GGACTGTATG GTGAAGCTCA CTAACACTAT TGCTCCGACT CTTGCAGTTC TCGAGGTCAA GATGGGAGCG TTCATGTCCG GAGTTCGAGA GCTGTGGCTG GAATATATCA AAGATATGCC TGCTGAGTGC ACGTCTAGAC AGGCTGAGGT ATATCAACGT TACATTTCTG CATGTCTATA GGAACAAAAA AATCGAGTGA CAGAGAAGGA TATCACTATG GCTGATTACC TCACCCTTCG ACGAGGTGCC GGGTGTGTGC CGGCGTTTCT TGTGAGTAAC ACATAACATC ACGGACCTTT CTTTTCTTTC CTCCTGTTCT TAGGATGGAA ACCATCATTG CAGAAGTTTT GAGTGGTTTC GTCTACTGCA GGTGTTCGTA GATCGGATCA TTGAGCATAA AAGAGCAAAC CGTCTTCCCG ACAGCTTGTT CTACGGAGAA GATATGCAGA ATCTGCTGGC CGCCTGTTCT GACATCGTAT GTTGGCATAA TGACATTTTC AGTTTCCAGA GGGTACGTTC AGCGTAGCAC ACTCCGCATC ATATGTGTCT ACCACATTCA CACGGCCCGA CGTGTGACTT TGAACTACAA CCTTCTTTGA CG |
mRNA UTR + CDS |
| >Mp3g05130.1 GGAAAACTAG CCATGAGGGT CTGAGCTTCG AGATTTCCAA CTTAGACTTA GGATTCATAA ATCCACGCTG TGCGGCAGGT TGATGTAGAT TTCTATCCAC CATCATTTTT GGACTGTATG GTGAAGCTCA CTAACACTAT TGCTCCGACT CTTGCAGTTC TCGAGGTCAA GATGGGAGCG TTCATGTCCG GAGTTCGAGA GCTGTGGCTG GAATATATCA AAGATATGCC TGCTGAGTGC ACGTCTAGAC AGGCTGAGGT ATATCAACGT TACATTTCTG CATGTCTATA GGAACAAAAA AATCGAGTGA CAGAGAAGGA TATCACTATG GCTGATTACC TCACCCTTCG ACGAGGTGCC GGGTGTGTGC CGGCGTTTCT TGTGTTCGTA GATCGGATCA TTGAGCATAA AAGAGCAAAC CGTCTTCCCG ACAGCTTGTT CTACGGAGAA GATATGCAGA ATCTGCTGGC CGCCTGTTCT GACATCGTAT GTTGGCATAA TGACATTTTC AGTTTCCAGA GGGTACGTTC AGCGTAGCAC ACTCCGCATC ATATGTGTCT ACCACATTCA CACGGCCCGA CGTGTGACTT TGAACTACAA CCTTCTTTGA CG |
CDS |
| >Mp3g05130.1 ATGGCTGATT ACCTCACCCT TCGACGAGGT GCCGGGTGTG TGCCGGCGTT TCTTGTGTTC GTAGATCGGA TCATTGAGCA TAAAAGAGCA AACCGTCTTC CCGACAGCTT GTTCTACGGA GAAGATATGC AGAATCTGCT GGCCGCCTGT TCTGACATCG TATGTTGGCA TAATGACATT TTCAGTTTCC AGAGGGTACG TTCAGCGTAG |
Protein |
| >Mp3g05130.1 MADYLTLRRG AGCVPAFLVF VDRIIEHKRA NRLPDSLFYG EDMQNLLAAC SDIVCWHNDI FSFQRVRSA |