Mp3g05740



Description

Annotation

Database ID Description
Pfam PF00141 Peroxidase
Gene3D G3DSA:1.10.420.10 Peroxidase, domain 2
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:1.10.520.10 -
SUPERFAMILY SSF48113 Heme-dependent peroxidases
PANTHER PTHR31517 -
PRINTS PR00461 Plant peroxidase signature
FunFam G3DSA:1.10.420.10:FF:000001 Peroxidase
PRINTS PR00458 Haem peroxidase superfamily signature
ProSiteProfiles PS50873 Plant heme peroxidase family profile.
CDD cd00693 secretory_peroxidase
ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature.
KEGG K00430 peroxidase [EC:1.11.1.7]
MapolyID Mapoly0006s0045 -
GO GO:0042744 hydrogen peroxide catabolic process
GO GO:0004601 peroxidase activity
GO GO:0020037 heme binding
GO GO:0006979 response to oxidative stress

Nomenclature

Gene symbol Product Transcript ID Status
MpPOD22 Peroxidase Published

Transcript models

Transcript ID Location Sequences Extract region
Mp3g05740.1 chr3:6176697..6179128 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g05740 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g05740 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.