Mp3g09110



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF47113 Histone-fold
Pfam PF00808 Histone-like transcription factor (CBF/NF-Y) and archaeal histone
PANTHER PTHR46172 DNA POLYMERASE EPSILON SUBUNIT 3
Gene3D G3DSA:1.10.20.10 Histone, subunit A
KEGG K02326 DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
KOG KOG0870 DNA polymerase epsilon, subunit D; C-term missing; [K]
MapolyID Mapoly0105s0006 -
GO GO:0008623 CHRAC
GO GO:0008622 epsilon DNA polymerase complex
GO GO:0031490 chromatin DNA binding
GO GO:0006974 DNA damage response
GO GO:0031507 heterochromatin formation
GO GO:0006272 leading strand elongation
GO GO:0046982 protein heterodimerization activity

Nomenclature

Gene symbol Product Transcript ID Status
MpCCAAT-NFYB3 transcription factor, CCAAT-NFYB Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp3g09110.1 chr3:9474444..9476886 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g09110 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g09110 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.