Mp3g18570



Description

Annotation

Database ID Description
PANTHER PTHR10362 HISTIDINE AMMONIA-LYASE
SUPERFAMILY SSF48557 L-aspartase-like
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:1.20.200.10 Fumarase/aspartase (Central domain)
Gene3D G3DSA:1.10.274.20 -
Gene3D G3DSA:1.10.275.10 -
Pfam PF00221 Aromatic amino acid lyase
KOG KOG0222 Phenylalanine and histidine ammonia-lyase; [Q]
MapolyID Mapoly0142s0036 -
GO GO:0003824 catalytic activity
GO GO:0016841 ammonia-lyase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpPAL-like1 Secondary metabolism enzyme Provisional
This is a provisional entry. If you want to update the entry, please contact the administrator.

Transcript models

Transcript ID Location Sequences Extract region
Mp3g18570.1 chr3:20420361..20422796 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g18570 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g18570 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.