Mp4g03020
Description
Annotation
| Database | ID | Description |
|---|---|---|
| NCBIfam | TIGR00861 | MIP family channel protein |
| PRINTS | PR00783 | Major intrinsic protein family signature |
| Gene3D | G3DSA:1.20.1080.10 | Glycerol uptake facilitator protein. |
| ProSitePatterns | PS00221 | MIP family signature. |
| SUPERFAMILY | SSF81338 | Aquaporin-like |
| CDD | cd00333 | MIP |
| PANTHER | PTHR45687 | AQUAPORIN OR AQUAGLYCEROPORIN RELATED |
| Pfam | PF00230 | Major intrinsic protein |
| KEGG | K09872 | aquaporin PIP |
| KOG | KOG0223 | Aquaporin (major intrinsic protein family); [G] |
| MapolyID | Mapoly0201s0003 | - |
| GO | GO:0055085 | transmembrane transport |
| GO | GO:0015250 | water channel activity |
| GO | GO:0015267 | channel activity |
| GO | GO:0005886 | plasma membrane |
| GO | GO:0016020 | membrane |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpPIP1 | Major intrinsic protein | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp4g03020 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp4g03020.1 TAAGCTCCAG TCGGTCCTTC GCAGTGCCTG GCGCGCGGCA CCGGTGGTCA GATCGCTTTC CAAGCCCTCT GTACCATTCG GCTACTGCTA GCTTGCTCTG AAGACTGAAC TAGGAACAAT TTGCCCTCAC AATAGATTCA AGGACTCAGA ATTCGGTCAG ACCCTTCAGG CTCTCAGCAT CACCCATTCC ACTTTCCACA TCTCGATCGG TCGCCGACAT TGAATTCTGT ACATACCGAG GTACGAAGCG ACCGGTGGGA GTGATGCAGG CCTGAGATCG ATTATGATCG AGGCTCGGAG CCTGAGCTTC CTGTCCTAGA GTCGAGGGAG ATGTTGTAGT TTACGAGGTA AGCCTCTTCA GGAGCCTACT GCTCTCGTAC CTTTCTCAGC TCACTCGAGA GTGTGAGGGA GAAAGGTCGA GATGGCTAGC ATGCAAGAGC AAGGTGTTAT CGTCGCCGCC TTGGGGATCA AAGGTCAGGA AATAAGTCCA GCAGCTTCCA GCTACCATGG AAGAATTGAT GGATCCGCAG CTCAGACCGG GGAGAAGGCC CAGGAGTACG TGGAACCGGC CCCTCATCCC ACTTGGGCTG TGGAAGAGTT CTACAAGTGG TCACTCTACA GAGCAGCCAT CGCCGAGTTC GTTGCCACCC TTCTGTTTGT CTACATCGGC GTTTCTGCTG CCATCGGGAA CGCTCGGGAC AGCCCTGACG GTGTAGGTGC ACTGGGAGTT GCATGGGCCT TCGGTGCAAC TATATTTGTG CTCGTTTACT GCACTGCTGG AGTTTCAGGT GAATCTTCAC CTCGAGAACC GCGTGACGCC CATGCATGCG TTTGACTGTC AGAAATTCTT CCACTCCTCC ACTCCACTCA CATGCAATAT TAATCCGAAC TGGTTCACGC TCTGAGCAGC ATTGAAATTT GAGGCAACAT GTTAAGCAGG AAAATAATCA CAGTATACTG CCATGTTCTG ATTATGGTGT GCATTTCAGG TATGTGTGGG TATCACGAAG CTCAGTATAT GCTTAAAGGG AAAAATGATA ATCAAAACCC CAGTCTGAGT GGAATGCATA AACCGCACGA TGGGAACTGA ATGTTTCAAA ATCTCAGCAC AGATACTCTT GAGCATGAAA TATCTATTTG CCAGCCTCAG CATTGAAGTT TTCTGACTCC TTGCACATAT GTACGGTTTG AACAGGAGGG CACATCAACC CTGCGGTGAC ATTGGGCCTT CTTCTCGGTA GAAGGCTCTC TATTCCTCGT GCGTTGCTTT ACATGGTCGC ACAGGTACTG GGCGGCATAT GTGGAGCAGG ACTCGTGAAA GCTCTGCAGA AGAGACCTTT CCAGCGCTAC AACGGTGGAA CCAACTTTGT GGCTCAAGAC TTGTCGACCT CCACGGGTCT GGCAGCAGAG ATCATCGGCA CCTTCGTACT GGTATACGTG GTCTACTCGG CAACAGATGG CAAGCGCAGA GCTCGTGACT CCCACGTCCC GGTACTCGCA CGTTCCTATA AATTTCTCGT TCCAATTAAA TCGTGAAACG AAGAGTATGA CCAACCATAG GAAAATGATT TGAGATATAC ATATTTGGAG TAAATTTAAC CTGATTGTTT CTAAACCGAG GCCTCTGATG CCGATGAGTT CCTGGCATAT AAGAGTGTTT GAACTTGCCA AACGTATTTC TCAGGTTCTC GCACCTCTAC CAATCGGATT GGCAGTGTTT GTGGTACATT TGGCTACAAT TCCCATCACA GGGACGGGAA TCAACCCTGC ACGAAGCTTT GGTCCTGCTG TTCTGTGGGG TAACGAGCTC GCCTGGGACG ACCAGGTATA CATAGCCTCA AAAAAGGCCT GTTATGAAAC ATTTTGCAAT CGAATACAGC GATTCGACCA CACCTGCTCA TTTTACTGGG AACAAAAAAT ACCGCCTCGA TTAATTGTGC TGTTAACAAG CACCAAGGCA TTGAGTGGAG TGTTTTGTCC GAGTGTCCCC CCCTTTCGCT GAGAATGGTC ATTCCCTTGC AAGTAGGTCG CTCCTCACGC TCCTGCAGAT GGTAGAAAGT TTCGAAAATC ATACTGCTAT CGAAGTGTCC CAACTTGCTT CCGTTCTCAA TTCCTACGGT TCTTGAGCAT TGAGTGGAGT CGTAGTTGTC TGCAGCTTAT GAATCTGATT CGATTTTGTG CAGTGGATCT TCTGGGTGGG TCCTTTCATC GGCGCTTCTT TGGCAGCGGC TTACCACCAA TTCGTCATCC GGTCTCTTCC ACTGGGATCT CATTTCCTCC TCCCCACCAT TCCTTTGACC TTGGTGCCGT TCCAACTGCC CCATGCGGCT CCTAAAGCGA TCGAGCACAT GACATCTGGT TAAGGGAGAA CTGTAAACAG AAAAATCTGC TGACAACATT GAAGCTCACC AGGCACTTGT AAATACAGTG ATTCGTAGCC ACCTGATGGA CCTATTTCGC CTCTAATACT TGAACAATTT CTGAGATTCC TGATCTTGCT TCAAAGCTAC ATACGAAGAC GAACAGAATA AGATCGATCA CCTCTGTATC TATGAGAAAG TGATGACTAG GTAGGTATCT CCTTCATTAT ATGCCTTTGA ATCTGAACCT GAGGCTGTGC TCAAGCAGCT GCAGACGGAG ACTCTCCTCT CACCATAGAA GACAATATCC CCTGGAATTT GATTTACCGA ACGGGGCATG AGACATGGAC CTGCAAGTTG AACTTTCATA GATTTCATCG GAGAATTTAT CTCCAAAGAA GTGTCATTGG ATACCTTCTC AATAAACTTT GCCGTGTTGA TATTTCC |
mRNA UTR + CDS |
| >Mp4g03020.1 TAAGCTCCAG TCGGTCCTTC GCAGTGCCTG GCGCGCGGCA CCGGTGGTCA GATCGCTTTC CAAGCCCTCT GTACCATTCG GCTACTGCTA GCTTGCTCTG AAGACTGAAC TAGGAACAAT TTGCCCTCAC AATAGATTCA AGGACTCAGA ATTCGGTCAG ACCCTTCAGG CTCTCAGCAT CACCCATTCC ACTTTCCACA TCTCGATCGG TCGCCGACAT TGAATTCTGT ACATACCGAG GTACGAAGCG ACCGGTGGGA GTGATGCAGG CCTGAGATCG ATTATGATCG AGGCTCGGAG CCTGAGCTTC CTGTCCTAGA GTCGAGGGAG ATGTTGTAGT TTACGAGGTA AGCCTCTTCA GGAGCCTACT GCTCTCGTAC CTTTCTCAGC TCACTCGAGA GTGTGAGGGA GAAAGGTCGA GATGGCTAGC ATGCAAGAGC AAGGTGTTAT CGTCGCCGCC TTGGGGATCA AAGGTCAGGA AATAAGTCCA GCAGCTTCCA GCTACCATGG AAGAATTGAT GGATCCGCAG CTCAGACCGG GGAGAAGGCC CAGGAGTACG TGGAACCGGC CCCTCATCCC ACTTGGGCTG TGGAAGAGTT CTACAAGTGG TCACTCTACA GAGCAGCCAT CGCCGAGTTC GTTGCCACCC TTCTGTTTGT CTACATCGGC GTTTCTGCTG CCATCGGGAA CGCTCGGGAC AGCCCTGACG GTGTAGGTGC ACTGGGAGTT GCATGGGCCT TCGGTGCAAC TATATTTGTG CTCGTTTACT GCACTGCTGG AGTTTCAGGA GGGCACATCA ACCCTGCGGT GACATTGGGC CTTCTTCTCG GTAGAAGGCT CTCTATTCCT CGTGCGTTGC TTTACATGGT CGCACAGGTA CTGGGCGGCA TATGTGGAGC AGGACTCGTG AAAGCTCTGC AGAAGAGACC TTTCCAGCGC TACAACGGTG GAACCAACTT TGTGGCTCAA GACTTGTCGA CCTCCACGGG TCTGGCAGCA GAGATCATCG GCACCTTCGT ACTGGTATAC GTGGTCTACT CGGCAACAGA TGGCAAGCGC AGAGCTCGTG ACTCCCACGT CCCGGTTCTC GCACCTCTAC CAATCGGATT GGCAGTGTTT GTGGTACATT TGGCTACAAT TCCCATCACA GGGACGGGAA TCAACCCTGC ACGAAGCTTT GGTCCTGCTG TTCTGTGGGG TAACGAGCTC GCCTGGGACG ACCAGTGGAT CTTCTGGGTG GGTCCTTTCA TCGGCGCTTC TTTGGCAGCG GCTTACCACC AATTCGTCAT CCGGTCTCTT CCACTGGGAT CTCATTTCCT CCTCCCCACC ATTCCTTTGA CCTTGGTGCC GTTCCAACTG CCCCATGCGG CTCCTAAAGC GATCGAGCAC ATGACATCTG GTTAAGGGAG AACTGTAAAC AGAAAAATCT GCTGACAACA TTGAAGCTCA CCAGGCACTT GTAAATACAG TGATTCGTAG CCACCTGATG GACCTATTTC GCCTCTAATA CTTGAACAAT TTCTGAGATT CCTGATCTTG CTTCAAAGCT ACATACGAAG ACGAACAGAA TAAGATCGAT CACCTCTGTA TCTATGAGAA AGTGATGACT AGGTAGGTAT CTCCTTCATT ATATGCCTTT GAATCTGAAC CTGAGGCTGT GCTCAAGCAG CTGCAGACGG AGACTCTCCT CTCACCATAG AAGACAATAT CCCCTGGAAT TTGATTTACC GAACGGGGCA TGAGACATGG ACCTGCAAGT TGAACTTTCA TAGATTTCAT CGGAGAATTT ATCTCCAAAG AAGTGTCATT GGATACCTTC TCAATAAACT TTGCCGTGTT GATATTTCC |
CDS |
| >Mp4g03020.1 ATGGCTAGCA TGCAAGAGCA AGGTGTTATC GTCGCCGCCT TGGGGATCAA AGGTCAGGAA ATAAGTCCAG CAGCTTCCAG CTACCATGGA AGAATTGATG GATCCGCAGC TCAGACCGGG GAGAAGGCCC AGGAGTACGT GGAACCGGCC CCTCATCCCA CTTGGGCTGT GGAAGAGTTC TACAAGTGGT CACTCTACAG AGCAGCCATC GCCGAGTTCG TTGCCACCCT TCTGTTTGTC TACATCGGCG TTTCTGCTGC CATCGGGAAC GCTCGGGACA GCCCTGACGG TGTAGGTGCA CTGGGAGTTG CATGGGCCTT CGGTGCAACT ATATTTGTGC TCGTTTACTG CACTGCTGGA GTTTCAGGAG GGCACATCAA CCCTGCGGTG ACATTGGGCC TTCTTCTCGG TAGAAGGCTC TCTATTCCTC GTGCGTTGCT TTACATGGTC GCACAGGTAC TGGGCGGCAT ATGTGGAGCA GGACTCGTGA AAGCTCTGCA GAAGAGACCT TTCCAGCGCT ACAACGGTGG AACCAACTTT GTGGCTCAAG ACTTGTCGAC CTCCACGGGT CTGGCAGCAG AGATCATCGG CACCTTCGTA CTGGTATACG TGGTCTACTC GGCAACAGAT GGCAAGCGCA GAGCTCGTGA CTCCCACGTC CCGGTTCTCG CACCTCTACC AATCGGATTG GCAGTGTTTG TGGTACATTT GGCTACAATT CCCATCACAG GGACGGGAAT CAACCCTGCA CGAAGCTTTG GTCCTGCTGT TCTGTGGGGT AACGAGCTCG CCTGGGACGA CCAGTGGATC TTCTGGGTGG GTCCTTTCAT CGGCGCTTCT TTGGCAGCGG CTTACCACCA ATTCGTCATC CGGTCTCTTC CACTGGGATC TCATTTCCTC CTCCCCACCA TTCCTTTGAC CTTGGTGCCG TTCCAACTGC CCCATGCGGC TCCTAAAGCG ATCGAGCACA TGACATCTGG TTAA |
Protein |
| >Mp4g03020.1 MASMQEQGVI VAALGIKGQE ISPAASSYHG RIDGSAAQTG EKAQEYVEPA PHPTWAVEEF YKWSLYRAAI AEFVATLLFV YIGVSAAIGN ARDSPDGVGA LGVAWAFGAT IFVLVYCTAG VSGGHINPAV TLGLLLGRRL SIPRALLYMV AQVLGGICGA GLVKALQKRP FQRYNGGTNF VAQDLSTSTG LAAEIIGTFV LVYVVYSATD GKRRARDSHV PVLAPLPIGL AVFVVHLATI PITGTGINPA RSFGPAVLWG NELAWDDQWI FWVGPFIGAS LAAAYHQFVI RSLPLGSHFL LPTIPLTLVP FQLPHAAPKA IEHMTSG |