Mp4g04920



Description

Annotation

Database ID Description
SUPERFAMILY SSF47459 HLH, helix-loop-helix DNA-binding domain
Gene3D G3DSA:4.10.280.10 -
PANTHER PTHR31945 TRANSCRIPTION FACTOR SCREAM2-RELATED
ProSiteProfiles PS50888 Myc-type, basic helix-loop-helix (bHLH) domain profile.
SMART SM00353 finulus
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd11443 bHLH_AtAMS_like
Pfam PF00010 Helix-loop-helix DNA-binding domain
CDD cd04873 ACT_UUR-ACR-like
KOG KOG1318 Helix loop helix transcription factor EB; N-term missing; C-term missing; [K]
MapolyID Mapoly0150s0016 -
GO GO:0043565 sequence-specific DNA binding
GO GO:0005634 nucleus
GO GO:0003700 DNA-binding transcription factor activity
GO GO:0046983 protein dimerization activity
GO GO:0006355 regulation of DNA-templated transcription

Nomenclature

Gene symbol Product Transcript ID Status
MpBHLH17 transcription factor, bHLH Published
MpICE2 basic helix loop helix transcription factor Published

Associated Literature (AI-based literature mining, Beta-version)

A bHLH transcription factor (also called MpSCRM2) that heterodimerizes with MpSETA. Inducing MpSETA in the Mpice2 mutant background partially alleviated the ectopic phenotypes, indicating the defects are mediated in part by MpSETA-MpICE2 heterodimers.

3 core 1 peripheral

Moriya KC, Kono H, Lu YT, Loue-Manifel J, Oka Y, Matsushita T, Honjo MN, Ishizaki K, Kudoh H, Goodrich J, Shimada T. (2026) · Journal of experimental botany  research experimental subject
A bHLH transcription factor (also called MpSCRM2) that heterodimerizes with MpSETA. Inducing MpSETA in the Mpice2 mutant background partially alleviated the ectopic phenotypes, indicating the defects are mediated in part by MpSETA-MpICE2 heterodimers.
Doll, Y., et al. (2024) · Quantitative Plant Biology  research experimental subject
M. polymorpha ICE1/SCRM ortholog and heterodimerization partner of MpSETA/MpSMF. Knockout showed defective setal development, supporting conserved SMF-ICE1/SCRM heterodimerization in liverworts.
Moriya, K. C., et al. (2023) · Nature Plants  research experimental subject
Class-IIIb bHLH (Mp4g04920); heterodimerizes with MpSETA to control seta development.
Lu, Y.-T., et al. (2024) · Current Biology  research experimental comparator
ICE bHLH (MpbHLH17, Mp4g04920).

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g04920.1 chr4:6632883..6638460 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.