Mp4g10060



Description

Annotation

Database ID Description
Pfam PF00221 Aromatic amino acid lyase
Gene3D G3DSA:1.20.200.10 Fumarase/aspartase (Central domain)
PANTHER PTHR10362 HISTIDINE AMMONIA-LYASE
CDD cd00332 PAL-HAL
SUPERFAMILY SSF48557 L-aspartase-like
Gene3D G3DSA:1.10.274.20 -
ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature.
FunFam G3DSA:1.10.275.10:FF:000009 Phenylalanine ammonia-lyase
Gene3D G3DSA:1.10.275.10 -
NCBIfam TIGR01226 phenylalanine ammonia-lyase
KEGG K10775 phenylalanine ammonia-lyase [EC:4.3.1.24]
KOG KOG0222 Phenylalanine and histidine ammonia-lyase; [Q]
MapolyID Mapoly0132s0049 -
GO GO:0006559 L-phenylalanine catabolic process
GO GO:0003824 catalytic activity
GO GO:0005737 cytoplasm
GO GO:0016841 ammonia-lyase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpPAL8 Secondary metabolism enzyme, Salicylic acid related protein Provisional

Associated Literature (AI-based literature mining, Beta-version)

UVB-induced PAL (phenylalanine ammonia lyase) flavonoid-pathway gene (annotation).

0 core 1 peripheral

Clayton, W. A., et al. (2018) · Plant Journal  research experimental background
UVB-induced PAL (phenylalanine ammonia lyase) flavonoid-pathway gene (annotation).

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g10060.1 chr4:12854981..12858355 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.