| Database | ID | Description |
|---|---|---|
| ProSiteProfiles | PS51194 | Superfamilies 1 and 2 helicase C-terminal domain profile. |
| PANTHER | PTHR24031 | RNA HELICASE |
| SMART | SM00490 | helicmild6 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases |
| Pfam | PF00271 | Helicase conserved C-terminal domain |
| CDD | cd18787 | SF2_C_DEAD |
| Pfam | PF00270 | DEAD/DEAH box helicase |
| Gene3D | G3DSA:3.40.50.300 | - |
| KOG | KOG0350 | DEAD-box ATP-dependent RNA helicase; N-term missing; [A] |
| GO | GO:0005634 | nucleus |
| GO | GO:0003676 | nucleic acid binding |
| GO | GO:0005524 | ATP binding |
No gene symbols are registered for this gene.
Example of a newly identified DEAD-box family RNA helicase cluster gene in the v5.1 assembly. No experimental focus in this paper.
0 core 1 peripheral
Sequences: |
Gene UTR + CDS + intron |
| >Mp4g13330.1 AACTAAACCT TAAACCCCGA GCCTGTGTCA GGGATGCAGT CAAGGCCTCT CTGAAATCTG AAAACATGTC GTTGCTACTT TCTTTCCGAT TTCGCTCGGA TTACGCTCGG ATCACGTCTC GAAATTGTCA GTGAAGTAGA CATCAGATTA TTTATGTGAT CCACGTGCGG ACGTTTTGCG GAGCTTGGCG CAGAAGAGTA CGGGACGTCT GTGTGATAGA GATTCGTGAG AAGGGTTCAG TTTTCTTGTC ACATGGTTCG TCTAGATGTG CGCGAGCAAT TTTGCCCTGA AGATTAAATG CTTGCCTGCT GTTTAGGGGG CAACGATGTT TCAGGTGGAG CGCTGGCTGA GAGGAGAAAG TCGGAAGCGT GGATCTCCAT TACTATTAGA TCGTTTGAAT GCCAGAGCTC GGGAGCGGGC TGCTCTGCTT CCGCTTAGAG AGAAAGCGGA AGGTACTTCT CCAGGTAACA GGGAGAAAGT CTCGAACAAG GATTCTGATC CTGCACTGAG TAGAGATGAA AGCAAGAAGA GCCTCAGAGG TTGTGGTTGA GGAAGAATCT AATGCAGTGA GCGAAATTGA ACCTCATACT AGGCGAAAAA AGCGAAAGCA ACACCAGGAA CACAAGGCAG AATTGGCAAC CTTGATGGAC CACGAAGCTC CTGATTCTGC TGTAAAGATC AAAAAGCACA AGAAGCTGAA AGTCTCGGAT ACGACTGAAG AACATGTATT TCCTCTGGAA GCTCCTGCTT CTCCTGGAAC GGAAGAACAG GAAAGGAAGG TGAACGATAC TTTAACAAGT GAAGATAATA TAGAGCGAGC GGAAGAGACT TCTGCAGCCG ACATCGACAG AAGTGTCCCG GAGCTGGTTG AATTTCAAGA GTCCAAATTG GAGAAGAAAC GAAAGAAAGA AAAGAGGTTG AAGATACGAA GAGGGGGCAA TCTGGAACCA AGTGATGAAC TGGTTAACGC AAGAGGCGTA TCTGGAGAAG TAAGTCATTT TTGCACAGTC TCAGTATTAT CTTTATTCAT TCATATCCTC AACCGGTGAT CGAGAAAGAG ATGCATAATT TCACAATTTG TCTGAAAAGG TGGATGTGAT TGCAGATGGT GGCCCTTGGA AACAGATCAA TGAAGAGGAG CCTAACAGTA AGTCCCTAGG GGTTCCGGAT GAGGATGAGG AGCATGTAAT TACAGAGAAC ACTGACGAGT TGAACGCACT CGGAGCGGAC GATACTTCTG AATTTCCACA ATTGAGAGGG ATGTGGATAG AATCATGGGT CGTGATGTTA ATTTGGTTCC AGCAGAGTCG CAAGACCACG GGCCGGTGTT GCCATGGATG CGTGATCCGC TTGATATTGA TACCTACAAG GCCACCTCCC TGAGACAAGT GCCTGGCTTG GACACCAGGT AGCCTTGCCG TCCGTCCGTT TGTAATCATC TTCTATCTGC CCAGCACTTG AAGTTTGTCT CGATGTCCAG CCGATGATTC TTGGTGCGTT TCGAGTTACA TTGCAGACTT CAAGATGCTT TCGAAGGCAG GAATACAGTC GTTGTTTCCA GTACAGATGG CCGTGTGGCA CGAGACTGTG GGCCCTGGTT TAAGCGAGCG AGACGTCTGT GTCAGCTCGC CAACAGGCAG TGGCAAAACA CTATCTTACG CATTACCCAT CGTCCAAAAG TTATCGTCTC GGGTGATTCG TCTTCTTCGA GTTCTCGTAG TGCTCCAGGG ATCTAGCTGC GCAGGTGAGG TTCTTTTGAA ACGTAGTTTG GATGGTCTTT ATGTTGAGAA TCTCTCCTAT TTCGGGTCTA TGTTTACTAT TTGATTGTAC AACTATGAGA TAGAAAGGAA ATCCATGCTG ATGTATCAAA GTTTGGAATT CCTTGTTCAC GTGCTTCAAA GATTCTGCCC ATTTTCTGTA CAGGACATTT CAAGATCGTG AAAACCAGGG AGTTAGCGCT ACTTTAATCG ATGGCTTTTA TTGTTATGTA ACCTCTAGTA CCCATATTTG GCTGGCTTTC CAGTTCCTAT ATATCCGCTC AAGCTTCTCT TAAGGCCTTA AACCTTTGTA ATCGCGTTTC TTCAGGTTAA AGCAGTCTTT GACACCATCG CACCAGCAGT TGGTCTCTCA GTGGGACTAT CTGTGGGACA AACGTCAATT GTAGCTGAAG CGGCTGAATT GGTTCAGATT CGTAAGTCGA TGGTCCACAG TTTTGGAAAA TTTGAGGCTG CAACTCCCGA CCTTGCCGAA AACCAGGATG ACATACTTGT TGCAACTCCA GGGCGCTTGA TGGACCATAT TCGAAATACG AAAGGGTTCA CTCTTCAGCA CCTACAATTT CTCGTGAGTT TTTTCCGTGG TGAAAGAGGA AATAGAGGCA CTGCACTCCC ACGATTGATG AAGATGGTGT TATCGGCTAC CTTGACGAGA GATCCAGCAA AAATTGCACA ACTTGGTCTT CTCTGCCCCA TATATGTGGC GCCTGGTGCT GCTGGCAACC GGTATCAACT ACCAGAACAA CTTAAGTCTT ACAGGATGGT TCGTATCTCT GTTCACACAC GTTGCCACCA TAACTTGTTG CTGACTCAAT TTAGTTCACG TAGCCTTGGA GCCTGTGTTT GTTCAAACCT GCATCGCATG ATCCGTAACA GAAATTGTTG TCCTGAACAT CTTTGCAGGT CTGCAAACCG GGAGAGAAGC CCTTATATTT GGTAGCACTC TTACAACAGC TTTGCAGCCA AACAACCATT GTTTTCACTG CTTCTGTAGT GGCTACTCAT CGACTATATA CTCTGCTAAA ATGCTACTAA GGATTGTCAA GGTGGTTGAG TACTCAAGCT TGCAGCATCA ACAACCCCGC AGGTTTGTCC AAGACGTGTG TGCTTTTGAT GGGGTTTGTA GACCAATTAA CTAATAAGTA TATATTTTAA CATACAGACC TCTAAGTCGC AGGTTATTTC CTCTTTCTTC TGATTTATTG ATATTGGGAT GAATATCCAA GTCGGTTCCG TTCGTTTGTT ATCCGACATT CGTAGCTGGC TTCAATAATC CTGATGACTT GCCTCTATAT CATGCTTTAC AGTAAAGCGT TGGCAAAATT CCGGAATGGC CAGGCACAAG TGCTCATTGC CTCAGATGCG ATGACAAGGG GTATGGATGT GGAAGGTGTT GCAAACGTTG TCAATTATGA TATGCCTGTG TACGCAAAGA CCTACGTCCA TCGTGTTGGG CGCACTGTTC GAGCCGGACA GCCCGGGAGC TCTTATACTC TTCTTCGGAA GGAGGAGGTT CGCTTTCTGA ACATGCATAA ACCACAAAGT AGTTTGATCT ACATTCCATG TAACAAGTTC AATAGCGCTG TATCCGCTTC CTCCCATGTT GCTCGGGCTT ATTCAGCGCA GACCATCGTC TTGTTGTGTT TGTTTTTCCG GTTGTGCATA ACGGCCTCCA GTCATCTAAC CCGCTATGTG TGTTGATCTG TAAACCTGGG GATGTTTGCG CAGGTACGAC ACTTCAAACA GATGTTGAAG AAAGTCGACA ATAGCAAGTG CCAGGATTAT TCACTGCCGT CATCTGTCAC CGAGGAGCTT TATGAGTCTT ACACTGAAGG TACGCGTCTC ACACAGGGTG TGGTTTTCTT TCTGGGCTGA AGGCAGCTCT GTCTAGATAA CCACCTGTGT CTGATATTGT ACTCAATCGT ATAGCTGCTT CGGACCAATG CAATGGGACG TGATATTTTC AGAACTTTCG AACCTATGCT GTCTTTGCTT TGTTTTGGTT TTCGGTACTT CTCTAGCTTC ACACAATTAC CTTACAGTGG GAATGTTGCA TTGTGCTGGA CGTGCAGCTC TGCAGAAACT GAAGCAGATA ACAGCAGACG AGGCAGCATG AATTTCACAT GGCAGTCGGA CGCAGACAGA AGGGGAAAAT AAAGTTACTG GGCCGGAAGA GCTTTTCATA CGACCACGAG ATATCACTCA GCGTTTGGAG TACGATGATC TACTTATCCC TAGGCTCTGT CCAATTGAAG AAACACTGTG TGAACAAAAC AAAGAGCTGG TTGCTGATCG GATTCATATC AGTACTTTCA TTGTGCAATC CTAGTCCAGG ATTATAATGA TACGGTTTCG TTTCCACTTT AATTCACTTG TGAGTCGAGT TGCTGGGTTC CTGAGGAAGG TTCCGGGAGG TTCCCCTTCA TGTTTTCTAG TTCGC |
mRNA UTR + CDS |
| >Mp4g13330.1 AACTAAACCT TAAACCCCGA GCCTGTGTCA GGGATGCAGT CAAGGCCTCT CTGAAATCTG AAAACATGTC GTTGCTACTT TCTTTCCGAT TTCGCTCGGA TTACGCTCGG ATCACGTCTC GAAATTGTCA GTGAAGTAGA CATCAGATTA TTTATGTGAT CCACGTGCGG ACGTTTTGCG GAGCTTGGCG CAGAAGAGTA CGGGACGTCT GTGTGATAGA GATTCGTGAG AAGGGTTCAG TTTTCTTGTC ACATGGTTCG TCTAGATGTG CGCGAGCAAT TTTGCCCTGA AGATTAAATG CTTGCCTGCT GTTTAGGGGG CAACGATGTT TCAGGTGGAG CGCTGGCTGA GAGGAGAAAG TCGGAAGCGT GGATCTCCAT TACTATTAGA TCGTTTGAAT GCCAGAGCTC GGGAGCGGGC TGCTCTGCTT CCGCTTAGAG AGAAAGCGGA AGGTACTTCT CCAGGTAACA GGGAGAAAGT CTCGAACAAG GATTCTGATC CTGCACTGAG TAGAGATGAA AGCAAGAAGA GCCTCAGAGG TTGTGGTTGA GGAAGAATCT AATGCAGTGA GCGAAATTGA ACCTCATACT AGGCGAAAAA AGCGAAAGCA ACACCAGGAA CACAAGGCAG AATTGGCAAC CTTGATGGAC CACGAAGCTC CTGATTCTGC TGTAAAGATC AAAAAGCACA AGAAGCTGAA AGTCTCGGAT ACGACTGAAG AACATGTATT TCCTCTGGAA GCTCCTGCTT CTCCTGGAAC GGAAGAACAG GAAAGGAAGG TGAACGATAC TTTAACAAGT GAAGATAATA TAGAGCGAGC GGAAGAGACT TCTGCAGCCG ACATCGACAG AAGTGTCCCG GAGCTGGTTG AATTTCAAGA GTCCAAATTG GAGAAGAAAC GAAAGAAAGA AAAGAGGTTG AAGATACGAA GAGGGGGCAA TCTGGAACCA AGTGATGAAC TGGTTAACGC AAGAGGCGTA TCTGGAGAAA TGGTGGCCCT TGGAAACAGA TCAATGAAGA GGAGCCTAAC AGTAAGTCCC TAGGGGTTCC GGATGAGGAT GAGGAGCATG TAATTACAGA GAACACTGAC GAGTTGAACG CACTCGGAGC GGACGATACT TCTGAATTTC CACAATTGAG AGGGATGTGG ATAGAATCAT GGGTCGTGAT GTTAATTTGG TTCCAGCAGA GTCGCAAGAC CACGGGCCGG TGTTGCCATG GATGCGTGAT CCGCTTGATA TTGATACCTA CAAGGCCACC TCCCTGAGAC AAGTGCCTGG CTTGGACACC AGGTAGCCTT GCCGTCCGTC CGTTTGTAAT CATCTTCTAT CTGCCCAGCA CTTGAAGTTT GTCTCGATGT CCAGCCGATG ATTCTTGGTG CGTTTCGAGT TACATTGCAG ACTTCAAGAT GCTTTCGAAG GCAGGAATAC AGTCGTTGTT TCCAGTACAG ATGGCCGTGT GGCACGAGAC TGTGGGCCCT GGTTTAAGCG AGCGAGACGT CTGTGTCAGC TCGCCAACAG GCAGTGGCAA AACACTATCT TACGCATTAC CCATCGTCCA AAAGTTATCG TCTCGGGTGA TTCGTCTTCT TCGAGTTCTC GTAGTGCTCC AGGGATCTAG CTGCGCAGGT GAGGTTAAAG CAGTCTTTGA CACCATCGCA CCAGCAGTTG GTCTCTCAGT GGGACTATCT GTGGGACAAA CGTCAATTGT AGCTGAAGCG GCTGAATTGG TTCAGATTCG TCTGCAAACC GGGAGAGAAG CCCTTATATT TGGTAGCACT CTTACAACAG CTTTGCAGCC AAACAACCAT TGTTTTCACT GCTTCTGTAG TGGCTACTCA TCGACTATAT ACTCTGCTAA AATGCTACTA AGGATTGTCA AGGTGGTTGA GTACTCAAGC TTGCAGCATC AACAACCCCG CAGTAAAGCG TTGGCAAAAT TCCGGAATGG CCAGGCACAA GTGCTCATTG CCTCAGATGC GATGACAAGG GGTATGGATG TGGAAGGTGT TGCAAACGTT GTCAATTATG ATATGCCTGT GTACGCAAAG ACCTACGTCC ATCGTGTTGG GCGCACTGTT CGAGCCGGAC AGCCCGGGAG CTCTTATACT CTTCTTCGGA AGGAGGAGGT ACGACACTTC AAACAGATGT TGAAGAAAGT CGACAATAGC AAGTGCCAGG ATTATTCACT GCCGTCATCT GTCACCGAGG AGCTTTATGA GTCTTACACT GAAGCTCTGC AGAAACTGAA GCAGATAACA GCAGACGAGG CAGCATGAAT TTCACATGGC AGTCGGACGC AGACAGAAGG GGAAAATAAA GTTACTGGGC CGGAAGAGCT TTTCATACGA CCACGAGATA TCACTCAGCG TTTGGAGTAC GATGATCTAC TTATCCCTAG GCTCTGTCCA ATTGAAGAAA CACTGTGTGA ACAAAACAAA GAGCTGGTTG CTGATCGGAT TCATATCAGT ACTTTCATTG TGCAATCCTA GTCCAGGATT ATAATGATAC GGTTTCGTTT CCACTTTAAT TCACTTGTGA GTCGAGTTGC TGGGTTCCTG AGGAAGGTTC CGGGAGGTTC CCCTTCATGT TTTCTAGTTC GC |
CDS |
| >Mp4g13330.1 ATGCTTTCGA AGGCAGGAAT ACAGTCGTTG TTTCCAGTAC AGATGGCCGT GTGGCACGAG ACTGTGGGCC CTGGTTTAAG CGAGCGAGAC GTCTGTGTCA GCTCGCCAAC AGGCAGTGGC AAAACACTAT CTTACGCATT ACCCATCGTC CAAAAGTTAT CGTCTCGGGT GATTCGTCTT CTTCGAGTTC TCGTAGTGCT CCAGGGATCT AGCTGCGCAG GTGAGGTTAA AGCAGTCTTT GACACCATCG CACCAGCAGT TGGTCTCTCA GTGGGACTAT CTGTGGGACA AACGTCAATT GTAGCTGAAG CGGCTGAATT GGTTCAGATT CGTCTGCAAA CCGGGAGAGA AGCCCTTATA TTTGGTAGCA CTCTTACAAC AGCTTTGCAG CCAAACAACC ATTGTTTTCA CTGCTTCTGT AGTGGCTACT CATCGACTAT ATACTCTGCT AAAATGCTAC TAAGGATTGT CAAGGTGGTT GAGTACTCAA GCTTGCAGCA TCAACAACCC CGCAGTAAAG CGTTGGCAAA ATTCCGGAAT GGCCAGGCAC AAGTGCTCAT TGCCTCAGAT GCGATGACAA GGGGTATGGA TGTGGAAGGT GTTGCAAACG TTGTCAATTA TGATATGCCT GTGTACGCAA AGACCTACGT CCATCGTGTT GGGCGCACTG TTCGAGCCGG ACAGCCCGGG AGCTCTTATA CTCTTCTTCG GAAGGAGGAG GTACGACACT TCAAACAGAT GTTGAAGAAA GTCGACAATA GCAAGTGCCA GGATTATTCA CTGCCGTCAT CTGTCACCGA GGAGCTTTAT GAGTCTTACA CTGAAGCTCT GCAGAAACTG AAGCAGATAA CAGCAGACGA GGCAGCATGA |
Protein |
| >Mp4g13330.1 MLSKAGIQSL FPVQMAVWHE TVGPGLSERD VCVSSPTGSG KTLSYALPIV QKLSSRVIRL LRVLVVLQGS SCAGEVKAVF DTIAPAVGLS VGLSVGQTSI VAEAAELVQI RLQTGREALI FGSTLTTALQ PNNHCFHCFC SGYSSTIYSA KMLLRIVKVV EYSSLQHQQP RSKALAKFRN GQAQVLIASD AMTRGMDVEG VANVVNYDMP VYAKTYVHRV GRTVRAGQPG SSYTLLRKEE VRHFKQMLKK VDNSKCQDYS LPSSVTEELY ESYTEALQKL KQITADEAA |