Mp4g21790



Description

Annotation

Database ID Description
SMART SM00717 sant
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
CDD cd00167 SANT
ProSiteProfiles PS50090 Myb-like domain profile.
PANTHER PTHR48000 OS09G0431300 PROTEIN
Gene3D G3DSA:1.10.10.60 -
Pfam PF00249 Myb-like DNA-binding domain
Coils Coil Coil
SUPERFAMILY SSF46689 Homeodomain-like
FunFam G3DSA:1.10.10.60:FF:000015 Transcription factor RAX3
KEGG K09422 transcription factor MYB, plant
KOG KOG0048 Transcription factor, Myb superfamily; C-term missing; [K]
MapolyID Mapoly0874s0001 -

Nomenclature

Gene symbol Product Transcript ID Status
MpR2R3-MYB20 transcription factor, MYB Published

Associated Literature (AI-based literature mining, Beta-version)

transcription factor, MYB (from nomenclature)

0 core 1 peripheral

Suzuki, H., et al. (2023) · Plant Cell  research experimental background
MpR2R3-MYB20, paralog of GEMMA CUP-ASSOCIATED MYB1, upregulated in Mptir1-1ko cells in the mutant phenotype context.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g21790.1 chr4:28979086..28983697 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.