Mp6g13460



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
ProSitePatterns PS00028 Zinc finger C2H2 type domain signature.
Coils Coil Coil
KOG KOG0733 Nuclear AAA ATPase (VCP subfamily); C-term missing; [O]
MapolyID Mapoly0059s0004 -

Nomenclature

No gene symbols are registered for this gene.

Associated Literature (AI-based literature mining, Beta-version)

Target of MpmiR11865, encoding an ATPase valosin-containing protein. RT-qPCR shows inverse correlation with miRNA accumulation and the cleavage site lies within the 3'-UTR.

1 core 0 peripheral

Aggarwal, B., et al. (2024) · RNA Biology  research experimental subject
Target of MpmiR11865, encoding an ATPase valosin-containing protein. RT-qPCR shows inverse correlation with miRNA accumulation and the cleavage site lies within the 3'-UTR.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp6g13460.1 chr6:16710050..16719072 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp6g13460.2 chr6:16710050..16718757 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.