Mp7g12900



Description

Annotation

Database ID Description
ProSiteProfiles PS51375 Pentatricopeptide (PPR) repeat profile.
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF12854 PPR repeat
ProSiteProfiles PS50158 Zinc finger CCHC-type profile.
SUPERFAMILY SSF57756 Retrovirus zinc finger-like domains
Pfam PF13041 PPR repeat family
NCBIfam TIGR00756 pentatricopeptide repeat
PANTHER PTHR47931 OS01G0228400 PROTEIN
Pfam PF01535 PPR repeat
KEGG K17710 pentatricopeptide repeat domain-containing protein 1
KOG KOG4422 Uncharacterized conserved protein; N-term missing; C-term missing; [S]
KOG KOG4318 Bicoid mRNA stability factor; C-term missing; [A]
KOG KOG0199 ACK and related non-receptor tyrosine kinases; N-term missing; [T]
MapolyID Mapoly0003s0298 -
GO GO:0003676 nucleic acid binding
GO GO:0005515 protein binding
GO GO:0008270 zinc ion binding

Nomenclature

Gene symbol Product Transcript ID Status
MpPPR_8 Pentatricopeptide repeat proteins Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp7g12900.1 chr7:16138480..16143039 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp7g12900.2 chr7:16138480..16143039 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.