Mp1g00690



Description

Annotation

Database ID Description
Gene3D G3DSA:3.40.50.150 Vaccinia Virus protein VP39
FunFam G3DSA:3.40.50.150:FF:000554 Cation-transporting ATPase
Pfam PF02353 Mycolic acid cyclopropane synthetase
SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases
CDD cd02440 AdoMet_MTases
PANTHER PTHR43832 -
KOG KOG1270 Methyltransferases; N-term missing; C-term missing; [H]
MapolyID Mapoly0103s0018 -

Nomenclature

Gene symbol Product Transcript ID Status
MpLIME lipid droplets associated protein Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp1g00690.1 chr1:615412..619268 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g00690 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g00690 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.