Mp1g01170



Description

Annotation

Database ID Description
Coils Coil Coil
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:1.20.120.20 Apolipoprotein
Pfam PF13664 Domain of unknown function (DUF4149)
PANTHER PTHR47652 MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM44
KOG KOG2886 Uncharacterized conserved protein; [S]
KOG KOG4744 Uncharacterized conserved protein; N-term missing; [S]
KOG KOG4744 Uncharacterized conserved protein; [S]
MapolyID Mapoly0029s0129 -

Nomenclature

Gene symbol Product Transcript ID Status
MpLEA-like2 Late-embryogenesis abundant protein Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp1g01170.1 chr1:1290274..1293837 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g01170.2 chr1:1290274..1293820 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g01170 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g01170 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.