Mp1g03850
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:2.60.40.1820 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| SUPERFAMILY | SSF117070 | LEA14-like |
| PANTHER | PTHR31234 | LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY |
| Pfam | PF03168 | Late embryogenesis abundant protein |
| MapolyID | Mapoly0005s0222 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpLEA-like3 | Late-embryogenesis abundant protein | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g03850 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g03850.1 CATTTATGCG TTCTTGGCTG CATGCGCATG TTTGCCCCGC TCCCTTACCG TCCCCTCTCC GGAAGTCGTT GCCGCCGCGG GCGCTCGAGG CCCTCGCCAG AAGAGTGAAA GGGATGAACT GAAAAGCTTG CCGAGCTTTG TCTCCGTTTC TCGAACTTTG TCACTATCGA GCTTTTTGGA GGAATCCGCG TGGTCAGAAA TCTTCTTCAC TCTGGAGCGA GCACCGCGGA CGACGAGGAG GAGGGCGTTT TGCTGTCAGA TCGCCGCAGG GGATAGTGTT GTGTAGAGGG GTCGAGGTCT CGAGTGAGCA CATTCAATTG ATGCAGAAAG AGGTGGAACT GGGAAGTGGA AAAGAGGGCA AGGGTGGGAT GGATCGGGAG TCGAGGGGGA CCGAGCCCTT CGCGGTTCCG AGTCCGATGC GCGAGCCGAA GCCCGGCAAA AGGTCGAGGA AGAAATGCGT CCTCTGCTGC TGCGGAATCT GCACGGCAGT CATCGTCCTG GTGATTGTGA TTCTCATCAT TCTAGCGTTC ACGGTGTTCA AGCCCAAGGA TCCTGAGCTG ACCGTGAACT CTGTCACGCT GAACGGCTTG GACGTGAACT TGGCCAACAT TTTGACGAGT CCCAATCCGT CGGTCGGCAT AGACTTGGAC ACCAAGGTGA CAGTGAAGAA CCCGAATTAC GCAAGCTTCA AGTACAGGAA CACTACTGCT TACATTTACT ACCATGGCAA GGAGATTGGC GACTCGTCCA TCGAGGCCGG AGAAATCAAA TCCAGGAGCA GTGCTCAGTT AGACCTTCCT GTCAGTGTGA AAATTACGGG GGATCTCTTC AATAGCAACC TCACCACCGA TCTTCTCTCC GGCATTCTGC CTGTTGCCAC CAGGGTCGAG ATCAGGGGAA CGGCCAACTT TCTCAATATC ATCAAGCTGA AGAACGCCAG GTCTAATAGC TACTGCGAGC TTCAAATTTT TCTGAGCAAC TCTACTCTCA AGGACATCGA CTGCAAGAAC AAATTCAAAA TCTGAGGAAA TCAGAGTTTC CGCCACTCTC AATGTTCACT CTCGCTCGTC GCCCGGCGGA TAGCTTCAGT GCCGTACAAT TTGCAACGCC TGTCCTAGTC CGAGGAGAAG GCGAATGCAG AAGCAGCTGA GGCCGTGCGC TTCGTGTTTC TCCAGGGCAA GCTCAAGGAA TACGAGTGCT TCGCGCAGGT TTCGGCACTG CCTCAAACTC CATGTTATTG TTTGTACATT CAAGTTTCTC TCAGTCTTGT TTAATAGTTT CGCTCTTGTC AGGCCAGGTT AGTGGATCCT AAGAGGGTAG AGGCAGAAAT TCTAGCACAT TATTTGTGGA TGGGTTAGCT ATCCACACCC ATGAGAAAGA AGACGACTTG CTTGCGGCTG CAGCTCAGCC ACAATCAGCT CTAGTCAAAT TTGCTGTAAA ATGTCGACAT CGGATATCCT GATATAGAAA CCGATGAAAG TGCGGAGTAA GAGACCTCAC TGAGCGGATT ACATTATACC AAAAGAGGCA ATTAAAATTG TGGGATTTGA CGTCCCGTTC CGTTCCGTGA ATCTGGACCA AAACTGTAAG GCAGGTCTGA CAACGGAATT CTGTATTTAT CGGAATGAAA ACATTTTCAT ACTCATATGG TTTGTTGAAG CTAGTTGTTG TGGGGCCAGT GAAGGCTGTT AATAGAATTA TGAATCCTTA T |
mRNA UTR + CDS |
| >Mp1g03850.1 CATTTATGCG TTCTTGGCTG CATGCGCATG TTTGCCCCGC TCCCTTACCG TCCCCTCTCC GGAAGTCGTT GCCGCCGCGG GCGCTCGAGG CCCTCGCCAG AAGAGTGAAA GGGATGAACT GAAAAGCTTG CCGAGCTTTG TCTCCGTTTC TCGAACTTTG TCACTATCGA GCTTTTTGGA GGAATCCGCG TGGTCAGAAA TCTTCTTCAC TCTGGAGCGA GCACCGCGGA CGACGAGGAG GAGGGCGTTT TGCTGTCAGA TCGCCGCAGG GGATAGTGTT GTGTAGAGGG GTCGAGGTCT CGAGTGAGCA CATTCAATTG ATGCAGAAAG AGGTGGAACT GGGAAGTGGA AAAGAGGGCA AGGGTGGGAT GGATCGGGAG TCGAGGGGGA CCGAGCCCTT CGCGGTTCCG AGTCCGATGC GCGAGCCGAA GCCCGGCAAA AGGTCGAGGA AGAAATGCGT CCTCTGCTGC TGCGGAATCT GCACGGCAGT CATCGTCCTG GTGATTGTGA TTCTCATCAT TCTAGCGTTC ACGGTGTTCA AGCCCAAGGA TCCTGAGCTG ACCGTGAACT CTGTCACGCT GAACGGCTTG GACGTGAACT TGGCCAACAT TTTGACGAGT CCCAATCCGT CGGTCGGCAT AGACTTGGAC ACCAAGGTGA CAGTGAAGAA CCCGAATTAC GCAAGCTTCA AGTACAGGAA CACTACTGCT TACATTTACT ACCATGGCAA GGAGATTGGC GACTCGTCCA TCGAGGCCGG AGAAATCAAA TCCAGGAGCA GTGCTCAGTT AGACCTTCCT GTCAGTGTGA AAATTACGGG GGATCTCTTC AATAGCAACC TCACCACCGA TCTTCTCTCC GGCATTCTGC CTGTTGCCAC CAGGGTCGAG ATCAGGGGAA CGGCCAACTT TCTCAATATC ATCAAGCTGA AGAACGCCAG GTCTAATAGC TACTGCGAGC TTCAAATTTT TCTGAGCAAC TCTACTCTCA AGGACATCGA CTGCAAGAAC AAATTCAAAA TCTGAGGAAA TCAGAGTTTC CGCCACTCTC AATGTTCACT CTCGCTCGTC GCCCGGCGGA TAGCTTCAGT GCCGTACAAT TTGCAACGCC TGTCCTAGTC CGAGGAGAAG GCGAATGCAG AAGCAGCTGA GGCCGTGCGC TTCGTGTTTC TCCAGGGCAA GCTCAAGGAA TACGAGTGCT TCGCGCAGGT TTCGGCACTG CCTCAAACTC CATGTTATTG TTTGTACATT CAAGTTTCTC TCAGTCTTGT TTAATAGTTT CGCTCTTGTC AGGCCAGGTT AGTGGATCCT AAGAGGGTAG AGGCAGAAAT TCTAGCACAT TATTTGTGGA TGGGTTAGCT ATCCACACCC ATGAGAAAGA AGACGACTTG CTTGCGGCTG CAGCTCAGCC ACAATCAGCT CTAGTCAAAT TTGCTGTAAA ATGTCGACAT CGGATATCCT GATATAGAAA CCGATGAAAG TGCGGAGTAA GAGACCTCAC TGAGCGGATT ACATTATACC AAAAGAGGCA ATTAAAATTG TGGGATTTGA CGTCCCGTTC CGTTCCGTGA ATCTGGACCA AAACTGTAAG GCAGGTCTGA CAACGGAATT CTGTATTTAT CGGAATGAAA ACATTTTCAT ACTCATATGG TTTGTTGAAG CTAGTTGTTG TGGGGCCAGT GAAGGCTGTT AATAGAATTA TGAATCCTTA T |
CDS |
| >Mp1g03850.1 ATGCAGAAAG AGGTGGAACT GGGAAGTGGA AAAGAGGGCA AGGGTGGGAT GGATCGGGAG TCGAGGGGGA CCGAGCCCTT CGCGGTTCCG AGTCCGATGC GCGAGCCGAA GCCCGGCAAA AGGTCGAGGA AGAAATGCGT CCTCTGCTGC TGCGGAATCT GCACGGCAGT CATCGTCCTG GTGATTGTGA TTCTCATCAT TCTAGCGTTC ACGGTGTTCA AGCCCAAGGA TCCTGAGCTG ACCGTGAACT CTGTCACGCT GAACGGCTTG GACGTGAACT TGGCCAACAT TTTGACGAGT CCCAATCCGT CGGTCGGCAT AGACTTGGAC ACCAAGGTGA CAGTGAAGAA CCCGAATTAC GCAAGCTTCA AGTACAGGAA CACTACTGCT TACATTTACT ACCATGGCAA GGAGATTGGC GACTCGTCCA TCGAGGCCGG AGAAATCAAA TCCAGGAGCA GTGCTCAGTT AGACCTTCCT GTCAGTGTGA AAATTACGGG GGATCTCTTC AATAGCAACC TCACCACCGA TCTTCTCTCC GGCATTCTGC CTGTTGCCAC CAGGGTCGAG ATCAGGGGAA CGGCCAACTT TCTCAATATC ATCAAGCTGA AGAACGCCAG GTCTAATAGC TACTGCGAGC TTCAAATTTT TCTGAGCAAC TCTACTCTCA AGGACATCGA CTGCAAGAAC AAATTCAAAA TCTGA |
Protein |
| >Mp1g03850.1 MQKEVELGSG KEGKGGMDRE SRGTEPFAVP SPMREPKPGK RSRKKCVLCC CGICTAVIVL VIVILIILAF TVFKPKDPEL TVNSVTLNGL DVNLANILTS PNPSVGIDLD TKVTVKNPNY ASFKYRNTTA YIYYHGKEIG DSSIEAGEIK SRSSAQLDLP VSVKITGDLF NSNLTTDLLS GILPVATRVE IRGTANFLNI IKLKNARSNS YCELQIFLSN STLKDIDCKN KFKI |