Mp1g04410



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF16135 Tify domain binding domain
Coils Coil Coil
PANTHER PTHR31413 AFP HOMOLOG 2
KOG KOG1874 KEKE-like motif-containing transcription regulator (Rlr1)/suppressor of sin4; N-term missing; [K]
KOG KOG1984 Vesicle coat complex COPII, subunit SFB3; C-term missing; [U]
MapolyID Mapoly0005s0166 -
GO GO:0045892 negative regulation of DNA-templated transcription
GO GO:0007165 signal transduction
GO GO:0005634 nucleus

Nomenclature

Gene symbol Product Transcript ID Status
MpNINJA NINJA Published

Transcript models

Transcript ID Location Sequences Extract region
Mp1g04410.1 chr1:4790280..4798316 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g04410.2 chr1:4790280..4797815 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g04410 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g04410 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.