Mp1g08430



Description

Annotation

Database ID Description
SUPERFAMILY SSF48452 TPR-like
ProSiteProfiles PS51375 Pentatricopeptide (PPR) repeat profile.
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain
Pfam PF13812 Pentatricopeptide repeat domain
Gene3D G3DSA:3.30.1370.110 -
ProSiteProfiles PS51318 Twin arginine translocation (Tat) signal profile.
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00463 SMR_2
Pfam PF13041 PPR repeat family
PANTHER PTHR47939 MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE
ProSiteProfiles PS50828 Smr domain profile.
Pfam PF12854 PPR repeat
NCBIfam TIGR00756 pentatricopeptide repeat
SUPERFAMILY SSF160443 SMR domain-like
KEGG K17710 pentatricopeptide repeat domain-containing protein 1
KOG KOG4422 Uncharacterized conserved protein; N-term missing; C-term missing; [S]
KOG KOG4318 Bicoid mRNA stability factor; C-term missing; [A]
MapolyID Mapoly0036s0086 -
GO GO:0005515 protein binding

Nomenclature

Gene symbol Product Transcript ID Status
MpPPR_67 Pentatricopeptide repeat proteins Published

Associated Literature (AI-based literature mining, Beta-version)

Single-copy GUN1 gene studied via two CRISPR deletion lines (Mpgun1) and complementation of Arabidopsis Atgun1. Mpgun1 mutants are indistinguishable from wild-type under nonstress and MpGUN1 is not required for GUN1-type repression of PhANGs, showing the protein has an ancient conserved role but not in retrograde signalling.

1 core 0 peripheral

Honkanen, S., et al. (2022) · New Phytologist  research experimental subject
Single-copy GUN1 gene studied via two CRISPR deletion lines (Mpgun1) and complementation of Arabidopsis Atgun1. Mpgun1 mutants are indistinguishable from wild-type under nonstress and MpGUN1 is not required for GUN1-type repression of PhANGs, showing the protein has an ancient conserved role but not in retrograde signalling.

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g08430.1 chr1:8925303..8930752 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.