Mp1g14930



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF03141 Putative S-adenosyl-L-methionine-dependent methyltransferase
Gene3D G3DSA:3.40.50.150 Vaccinia Virus protein VP39
SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases
CDD cd02440 AdoMet_MTases
PANTHER PTHR10108 SAM-DEPENDENT METHYLTRANSFERASE
MapolyID Mapoly0033s0168 -
GO GO:0008168 methyltransferase activity
GO GO:0005737 cytoplasm

Nomenclature

Gene symbol Product Transcript ID Status
MpPMT.1 Cell wall related protein Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp1g14930.1 chr1:15693629..15702199 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g14930 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g14930 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.