Mp1g22930
Description
Annotation
| Database | ID | Description |
|---|---|---|
| ProSitePatterns | PS00211 | ABC transporters family signature. |
| CDD | cd03217 | ABC_FeS_Assembly |
| NCBIfam | TIGR01978 | Fe-S cluster assembly ATPase SufC |
| Gene3D | G3DSA:3.40.50.300 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases |
| Pfam | PF00005 | ABC transporter |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| SMART | SM00382 | AAA_5 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. |
| PANTHER | PTHR43204 | ABC TRANSPORTER I FAMILY MEMBER 6, CHLOROPLASTIC |
| KEGG | K09013 | Fe-S cluster assembly ATP-binding protein |
| KOG | KOG0055 | Multidrug/pheromone exporter, ABC superfamily; N-term missing; C-term missing; [Q] |
| MapolyID | Mapoly0065s0083 | - |
| GO | GO:0016887 | ATP hydrolysis activity |
| GO | GO:0005524 | ATP binding |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpABCI1 | ABC transporters | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g22930 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g22930.1 TTCGCTAAGT ATCGTTAAGG AGCCGGGACC ACTACTCGGT CGGCCGGTGC GACCACGGTA ATGCGTGGAA AGAAGGGAAG GCGAGCAGGG TGCTACTGCG TACGACGTGG TGGTGACTGG TGAGGCTGAT TGGACTGGAT TCTCCCCCGA CTCATTCAAT CTCTGCATCC TTCGATCGCG TGCGGTGAGT CGCAGAATTT GCAATTTCGG AATTTGTGCT GAGCGATGGC AGCGACAGGG GCCGTGGTCT CGGTTACAGG CGTCTGCTGG GAGGCATGTT TCCAGCCGCA GCGGAATAGG AGAGTTAGCG CGACGAAATT GCAGTCGTCC TCTGCCGATG CTGTCGTTGG CTTCTCCCGA AAATGCAGAG TGGAAGGAGC GACTCTGATG TCCAGTTGCA GCAGTGCAGT GAAACCTTCC TCCTCGTCGG TTTCTTCATG CTCTTCGAAG CCTCAGCAAC ACCACGGGCG GAGAGGCCGA GCGTTTGCGA CTATGGCAAC AATGGCTGAG TCACCCGTGG CATCCGAGCT GGAGAAGGTC GGGGATGTGC TCCTGGAAGT CAGGGGATTG TGCGCTGTGG TGGAAGCCAC TGGCAAGGAG ATTTTGCGTG GTGTGGATCT CACCGTTCGA CAAGGAGAGG TATGCCTGCA GGCAGCACAG TCGTTTTCGC TTTTGGAATC TATGCAGCTT GTAGTCATGT TCAAGCGACT GGCTTGAATT TTCCCCAGAA ACCGAGTTCA AATTCAACCT CTGTATAGGA CCTCTTAGAA AGCTTGCTCT TGATTTTGGG CGAATTTTGA AGAATGGTAC CGGTGGAGAA ATGATTTCGT TTTCATGAGA AACTGAGACC GAAAATCTGA AGAGGCCTAG ATGGTCGGAG TTCTGTATCA AAAGTGCCGT TGTTTTTGTT GTTCGTCGCG GCCTACACAA AGATATTACG AGAAAAATAT GTTGGGAATT GTTAGTCCGA TCAAGAGGTC TCATACGAGG GATGAAATTT TCTTCATAAT CAATAACGAC TGTATACGTA ATAATGAAAA TACATGAGAA TAAATATGAT GTGCTCACAC TGCCGTAGGC CAACTTTGAA ACGATGTGCA GGTGCATGCT ATCATGGGCA AGAATGGTTC GGGGAAGAGC ACGTTGTCCA AGGTGAGTCA TTCCGACAAT TTTTGGCATC CCATATGTAT GTTCTTGGAC GTGACAGTTC AGATAGATTG ACGGGAAGCA AGACGTGCGT ATGGCAGGTA CTGGTGGGTC ACCCAGATTA CTTGGTCACA AGTGGCACAG CAACCTACAA AGGAGAAAAT CTTTTTGACA AAGAGCCTGA AGAAAGGAGC CATGCTGGAC TTTTTTTGAG TTTCCAGTCT CCAGTTGAAA TCCCTGGAGT AAGCAACATG GATTTCTTAC GGATGGCCTG CAACGCCCGT CGCTCATCCC TCGGGCTTCC AGAGTTCGGT CCTCTTGAGG TGATTTTTGA TCTTTTAACA TCGTTCCTTT GCTGAGGAGG TGTATTTTGT CGTAATATAT TGTGGGCTAC GCTCGTGTTA CATTTCAGGT CCGATAGAAA CTTCAAGCAT ATTTCACGAC CACGAAATAA TCTAGTTTCA TTTTGTCATT GACAAGACGC ACATTTCTCC TCCCTTTACG TTGTTTGTCT CTCTTCATCC TTCTTCTGGA CTTATAACTG ATCTTCGTAT TTGAATCATT GTAATTTCTT ATGTCACACA GTTTTATGGA TTTCTATCTC CGAAGTTGGC TGCACTGAAT ATGGATCCAA GCTTTCTGGA TCGCAATGTG AACGAAGGTT TCAGTGGTGG TGAAAAGAAG CGTAATGAAA TTTTGCAACT AGCGGTACGC CCACTTTTAC TCACACCTTC AGCCTTACGA GGTGATAAAC CCTCGGAAGG CTGAAACCTC GAGGTTTATT ATCTGTTTAA TAACCAAGGT TCATAAATTT AAGGTTTTCT TTTCTTGTCA GTTCAGTATG TAAGGCTTGA ATCTTAGGTA GATGATACAG AGAGTTAGAA TGCTTGAAAG CCAGGGCGTA AACAGTCTTT ACTTTCAGCC CGAGTGGTGG AGAAAGTTTG GAGTTTGCAC AGAAGCACCG TAATATTGCG TTTTGGTTTT GGAGTAACCT GGACAATTAA CCTTCGTTCT TCAACTTTAG AAGACAAAAT TCCTCAAGCA CAAGGTTGAT ATTGACCTAC ATATCGACTT AGATTACCCC ATGTGACAAT GTCTGTACTT TCCACATGGG AAGCATATTG ATAGCCCAAA GAGACTCTCT CGTTCCCGGT CAGAGGTCGT TCATTCATCT GGAGAGACTG CAGTGTGTCT AGTGCTCACA TTCGGACCTG ACGTATGGTG TTTTTAAAAT TTAAGAATCA CGATCTCCAC TATGTACTAA AATCACGATC TGCACTATGT ACTTCCAGCC TCTCGATATT TCAGACACGA TTCGGATACA ACACAACGAT TGTCTTAAGC GTTGAATTTA CAGTTGGAAG AGTCTGGGGT TTCCTTTTCT TTCAAGAACT GGCTGCTGCT AAGCTCCAGG CACGAAACAA GCGGATCCTC TGTGCGGCTC TGTGCCGCTT GGTCTAAAGT TGTAGTCATT TCCACGTTTT GAATTTGTGA TAAGTGCCCT GTATACGACT CACCCTGTCT TATTGACGTC CAGGTGTTGG AGGCAGACAT GGCTATATTG GATGAGATAG ATTCTGGCTT AGATGTGGAC GCCTTGAGGG ATGTTGCTGC AGCCGTAAAT GGCCTGAGAA AGTCAGACAA TGCGGTTCTT ATGATTACCC ATTATCAGAG GCTTCTGGAC TACATCAAAC CCACATACGT TCATATTATG GTACGTATTC AAGTTTGTTA GCATTTGTAC TCGTTTTGCT CTAGCTTGTT CATCACTTCA TTTCTTTGGC AGCAGCAGTG ACTGGTCGGT CACTCGTTGT CTTAACAGGA AGCAGGGCGC ATCGTAAAGA CGGGCGATAG TTCTCTAGCT TTACAATTGG AGGCAGGGGG ATATGAAGCT CTGAAGGAGT CGGCTTGAGA TTGTGCCTCT GGGCGAATGT ATTGTAATTT TATTGCGATC TCTGAGCGAA TTGTCAAAAG AAAACGGGCA TTCTTTGCCC TCGGTGATGT AACACTATCT CATTCTCTTA GGAAATTTTC CGAGAGGATC AGGAGGAGAG CATAGGACCA AATAGTGGAA TCCCAATTCG AAGCCACCCA CTAAGCTACA GGCGAATTTC ACAATTGATA TGTTGAGCGC ACAATCATCA ACGCGATAGA TGTTGAAAGT CCTGTAGGTG AGTTTTTGTC CGATACTAAG AACATTTCGA TCACGCGTCT AATCTTTATG TAAAAGGAGC TTCTCGATCA CCTCTCGTAA ATAAAACTGC TGGAGAGATT TGGACTTGCA GGTACCAATA TGCTTTGTTC CTCCTCGTTT ACACAATACT ACCTTCAATG TGGTCCTGAT TTTGACAAGG TTTTACATTT TAGGTCACGA GATGCCGAAG TTAAAGACAC GTTTGAGGCA GTTAGTAGCA GCCGATGGTG GAAAGTTGGC TTTTGAAGAT ATCAGAT |
mRNA UTR + CDS |
| >Mp1g22930.1 TTCGCTAAGT ATCGTTAAGG AGCCGGGACC ACTACTCGGT CGGCCGGTGC GACCACGGTA ATGCGTGGAA AGAAGGGAAG GCGAGCAGGG TGCTACTGCG TACGACGTGG TGGTGACTGG TGAGGCTGAT TGGACTGGAT TCTCCCCCGA CTCATTCAAT CTCTGCATCC TTCGATCGCG TGCGGTGAGT CGCAGAATTT GCAATTTCGG AATTTGTGCT GAGCGATGGC AGCGACAGGG GCCGTGGTCT CGGTTACAGG CGTCTGCTGG GAGGCATGTT TCCAGCCGCA GCGGAATAGG AGAGTTAGCG CGACGAAATT GCAGTCGTCC TCTGCCGATG CTGTCGTTGG CTTCTCCCGA AAATGCAGAG TGGAAGGAGC GACTCTGATG TCCAGTTGCA GCAGTGCAGT GAAACCTTCC TCCTCGTCGG TTTCTTCATG CTCTTCGAAG CCTCAGCAAC ACCACGGGCG GAGAGGCCGA GCGTTTGCGA CTATGGCAAC AATGGCTGAG TCACCCGTGG CATCCGAGCT GGAGAAGGTC GGGGATGTGC TCCTGGAAGT CAGGGGATTG TGCGCTGTGG TGGAAGCCAC TGGCAAGGAG ATTTTGCGTG GTGTGGATCT CACCGTTCGA CAAGGAGAGG TGCATGCTAT CATGGGCAAG AATGGTTCGG GGAAGAGCAC GTTGTCCAAG GTACTGGTGG GTCACCCAGA TTACTTGGTC ACAAGTGGCA CAGCAACCTA CAAAGGAGAA AATCTTTTTG ACAAAGAGCC TGAAGAAAGG AGCCATGCTG GACTTTTTTT GAGTTTCCAG TCTCCAGTTG AAATCCCTGG AGTAAGCAAC ATGGATTTCT TACGGATGGC CTGCAACGCC CGTCGCTCAT CCCTCGGGCT TCCAGAGTTC GGTCCTCTTG AGTTTTATGG ATTTCTATCT CCGAAGTTGG CTGCACTGAA TATGGATCCA AGCTTTCTGG ATCGCAATGT GAACGAAGGT TTCAGTGGTG GTGAAAAGAA GCGTAATGAA ATTTTGCAAC TAGCGGTGTT GGAGGCAGAC ATGGCTATAT TGGATGAGAT AGATTCTGGC TTAGATGTGG ACGCCTTGAG GGATGTTGCT GCAGCCGTAA ATGGCCTGAG AAAGTCAGAC AATGCGGTTC TTATGATTAC CCATTATCAG AGGCTTCTGG ACTACATCAA ACCCACATAC GTTCATATTA TGGAAGCAGG GCGCATCGTA AAGACGGGCG ATAGTTCTCT AGCTTTACAA TTGGAGGCAG GGGGATATGA AGCTCTGAAG GAGTCGGCTT GAGATTGTGC CTCTGGGCGA ATGTATTGTA ATTTTATTGC GATCTCTGAG CGAATTGTCA AAAGAAAACG GGCATTCTTT GCCCTCGGTG ATGTAACACT ATCTCATTCT CTTAGGAAAT TTTCCGAGAG GATCAGGAGG AGAGCATAGG ACCAAATAGT GGAATCCCAA TTCGAAGCCA CCCACTAAGC TACAGGCGAA TTTCACAATT GATATGTTGA GCGCACAATC ATCAACGCGA TAGATGTTGA AAGTCCTGTA GGTGAGTTTT TGTCCGATAC TAAGAACATT TCGATCACGC GTCTAATCTT TATGTAAAAG GAGCTTCTCG ATCACCTCTC GTAAATAAAA CTGCTGGAGA GATTTGGACT TGCAGGTACC AATATGCTTT GTTCCTCCTC GTTTACACAA TACTACCTTC AATGTGGTCC TGATTTTGAC AAGGTTTTAC ATTTTAGGTC ACGAGATGCC GAAGTTAAAG ACACGTTTGA GGCAGTTAGT AGCAGCCGAT GGTGGAAAGT TGGCTTTTGA AGATATCAGA T |
CDS |
| >Mp1g22930.1 ATGGCAGCGA CAGGGGCCGT GGTCTCGGTT ACAGGCGTCT GCTGGGAGGC ATGTTTCCAG CCGCAGCGGA ATAGGAGAGT TAGCGCGACG AAATTGCAGT CGTCCTCTGC CGATGCTGTC GTTGGCTTCT CCCGAAAATG CAGAGTGGAA GGAGCGACTC TGATGTCCAG TTGCAGCAGT GCAGTGAAAC CTTCCTCCTC GTCGGTTTCT TCATGCTCTT CGAAGCCTCA GCAACACCAC GGGCGGAGAG GCCGAGCGTT TGCGACTATG GCAACAATGG CTGAGTCACC CGTGGCATCC GAGCTGGAGA AGGTCGGGGA TGTGCTCCTG GAAGTCAGGG GATTGTGCGC TGTGGTGGAA GCCACTGGCA AGGAGATTTT GCGTGGTGTG GATCTCACCG TTCGACAAGG AGAGGTGCAT GCTATCATGG GCAAGAATGG TTCGGGGAAG AGCACGTTGT CCAAGGTACT GGTGGGTCAC CCAGATTACT TGGTCACAAG TGGCACAGCA ACCTACAAAG GAGAAAATCT TTTTGACAAA GAGCCTGAAG AAAGGAGCCA TGCTGGACTT TTTTTGAGTT TCCAGTCTCC AGTTGAAATC CCTGGAGTAA GCAACATGGA TTTCTTACGG ATGGCCTGCA ACGCCCGTCG CTCATCCCTC GGGCTTCCAG AGTTCGGTCC TCTTGAGTTT TATGGATTTC TATCTCCGAA GTTGGCTGCA CTGAATATGG ATCCAAGCTT TCTGGATCGC AATGTGAACG AAGGTTTCAG TGGTGGTGAA AAGAAGCGTA ATGAAATTTT GCAACTAGCG GTGTTGGAGG CAGACATGGC TATATTGGAT GAGATAGATT CTGGCTTAGA TGTGGACGCC TTGAGGGATG TTGCTGCAGC CGTAAATGGC CTGAGAAAGT CAGACAATGC GGTTCTTATG ATTACCCATT ATCAGAGGCT TCTGGACTAC ATCAAACCCA CATACGTTCA TATTATGGAA GCAGGGCGCA TCGTAAAGAC GGGCGATAGT TCTCTAGCTT TACAATTGGA GGCAGGGGGA TATGAAGCTC TGAAGGAGTC GGCTTGA |
Protein |
| >Mp1g22930.1 MAATGAVVSV TGVCWEACFQ PQRNRRVSAT KLQSSSADAV VGFSRKCRVE GATLMSSCSS AVKPSSSSVS SCSSKPQQHH GRRGRAFATM ATMAESPVAS ELEKVGDVLL EVRGLCAVVE ATGKEILRGV DLTVRQGEVH AIMGKNGSGK STLSKVLVGH PDYLVTSGTA TYKGENLFDK EPEERSHAGL FLSFQSPVEI PGVSNMDFLR MACNARRSSL GLPEFGPLEF YGFLSPKLAA LNMDPSFLDR NVNEGFSGGE KKRNEILQLA VLEADMAILD EIDSGLDVDA LRDVAAAVNG LRKSDNAVLM ITHYQRLLDY IKPTYVHIME AGRIVKTGDS SLALQLEAGG YEALKESA |