Mp1g24190



Description

Annotation

Database ID Description
PRINTS PR01333 Two pore domain K+ channel signature
ProSitePatterns PS00018 EF-hand calcium-binding domain.
FunFam G3DSA:1.10.287.70:FF:000167 Two-pore potassium channel 2-like
Pfam PF07885 Ion channel
Gene3D G3DSA:1.10.287.70 -
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF81324 Voltage-gated potassium channels
PANTHER PTHR11003 POTASSIUM CHANNEL, SUBFAMILY K
KEGG K05389 potassium channel subfamily K, other eukaryote
KOG KOG1418 Tandem pore domain K+ channel; [P]
MapolyID Mapoly0061s0102 -
GO GO:0005267 potassium channel activity
GO GO:0071805 potassium ion transmembrane transport
GO GO:0005887 plasma membrane
GO GO:0022841 potassium ion leak channel activity
GO GO:0009705 plant-type vacuole membrane
GO GO:0015271 outward rectifier potassium channel activity
GO GO:0030322 stabilization of membrane potential
GO GO:0016020 membrane

Nomenclature

Gene symbol Product Transcript ID Status
MpTPK1 Channels Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp1g24190.1 chr1:25648225..25652702 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g24190 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g24190 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.