Mp2g00770



Description

Annotation

Database ID Description
CDD cd05162 PWWP
PANTHER PTHR10688 PWWP DOMAIN-CONTAINING PROTEIN
SMART SM00293 PWWP_4
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50812 PWWP domain profile.
Pfam PF00855 PWWP domain
Gene3D G3DSA:2.30.30.140 -
SUPERFAMILY SSF63748 Tudor/PWWP/MBT
KOG KOG1904 Transcription coactivator; C-term missing; [K]
MapolyID Mapoly0028s0074 -

Nomenclature

Gene symbol Product Transcript ID Status
MpPWWP1 Chromatin related protein Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp2g00770.1 chr2:961668..966290 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g00770 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g00770 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.