Mp2g03020



Description

Annotation

Database ID Description
Gene3D G3DSA:2.60.120.10 Jelly Rolls
SUPERFAMILY SSF51182 RmlC-like cupins
CDD cd02216 cupin_GDO-like_N
PANTHER PTHR41517 1,2-DIOXYGENASE PROTEIN-RELATED
MapolyID Mapoly0075s0063 -
GO GO:0051213 dioxygenase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpCupin19 Cupin Provisional
This is a provisional entry. If you want to update the entry, please contact the administrator.

Transcript models

Transcript ID Location Sequences Extract region
Mp2g03020.1 chr2:3827619..3831527 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g03020 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g03020 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.