Mp2g12370
Description
Annotation
| Database | ID | Description |
|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| PANTHER | PTHR31234 | LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY |
| Pfam | PF03168 | Late embryogenesis abundant protein |
| MapolyID | Mapoly0026s0134 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpLEA-like8 | Late-embryogenesis abundant protein | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp2g12370 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp2g12370.1 GTTTTAGACA ATGGAGGAGT CTCGTACACC GATTTCGGTG CACTTTATGC CCTGAGAGCT CGTTGCCCTC GTGGACTTGA TGAGCTCCGC TTTCGCACGA GGCAGAGCAG AGGAGAGCAG CGGAGAGCAG TGCAGGAGTT TGCAGACGAG GGAGGCTGAA GAGTGTGGGG TGAAGATGCC GACCCCGAAA GGAAAGGGCG AGAAAGGGCT CGTCGTTCAG ACTCATCTCA GCGCGTCGAT GTATGAAGAG AGCTTCGATT TGCTGAGCCC CTCGCGGGAC TTCTCGGGCC AGTACACGCC CATGTCCGAG CCCCGGTTCA CGACGTCGCA GTCCTTGCCG CGAGCGGAGG CGAAAGCCAT GCCGCCCAAT CGAACGCAGT CCTCTCGATT CGCCGACAGG AGGCTGTCTC CTGCTGCGTC CATGGCCAGG TCGCCCACCA TGACGACCAT TGGCGGGCCG AAGGCGGGCT TGCTCGACGC GCAGGCTCTC GAGGATGGGA ATCGCAACGT CGACCTCGCT TTCACCAATA TGGGATACGC GGAGGTGCCG GCCGAGAAGC CCCGCGAGCC TCCCGTCTAC GACATTCCCA ACAGCAAGAG CTTCAAAATG CGCAAGCTTA AGGAGCCGAG CTTGGAAGAC GAGTGGAACG ACATCGTAGC CGAGAAGAAA AATCGGTACA GGGATTGCTG CTGCTGTGTG TTCAGCTCCG CCATCGTGGT GCTCATCGCC GCTGGCATTG TCTTCACGAC TATGTATTTC ATCCTCAAGC CTAGTCCGCC CACCATTCAT GTGTTAAACT TGAACGTCAC CGATTTCCGG CTGTTGTCAT CGACGACGAC GGACGGTGAG CCGCTGGTCG AAGCCAGCAT GACTTGCGTG GTGAGGATCA CCAACCCCAA CAAGTTCTCG GTGTTTCATC ACAGGGCATT GAATGTGAGC TTGAATTACA AGAGCGAAGT CTTGGGCCTC ATTTTGGTGC CAGGCTTCAA GCAGTCGGAG AAAAATGTGA CCGATCTGTT CGTTACGGTG CCCAAGTCCG TGGCCAAGAT TACGGATCAG GTGGACGCCA TTAATTTGCT CCAGGAGGTG AACGAGTCTA ATGTGAGGCT GGAGGTCAGA GGTTCGGCCG AGGGACATTA CAGAATTTTG GGAATTAACG TGAAGAAGCT CGATGCTCCA TTGCTGTGCA AGCTCAGTGT GAAGCCGGAA AACGAGGATA GCGCCGCCCA AATCATTTCC AGTAGTTGCT TCAATCCTGC CTGATCGTTT CAAGCATCAC AAGGTTTCAG AATCAAAGTG CACATTCTAC AAGTAGTTGG TTAGGGTGTT GATGGAATTG GGTAGCGCTG CAAGACACCT ATCGAGCACT GGAGCATCTT GCATGGTAGA CTTACAAGGC GACACATAGG CATTCTATTT AAGTAGAATT TTTTTTTGGC GCGCCTGCAT GGAGACTAGT CCCATCTTCC CGCTTTCAGA ATAGGGTCAG TTCTAGAATA GAATCCGCAT GCTCGTCCAC GACATGGCAG GGTCGAGAGG AAATTTCAGC GAGGAACACA TTTTTCTTTG TACAGAGTGA CTGGCCGACT GAGTTGATCT CGAGTCCTCC CACGACTGCG ACGGTCTGCG GAATGTGTGA GAAGCAATAC AATCCTGAAA GAAAGGATTT CCATATCCAT TAATTTGCTG CTTTGCTTAT TCCGATATGT AAGTACATAT TTAACGTCAA ATTTCCCAAC TGTACATAAT AAAGCAATGG AACAAAGCCA TGGCTCCTC |
mRNA UTR + CDS |
| >Mp2g12370.1 GTTTTAGACA ATGGAGGAGT CTCGTACACC GATTTCGGTG CACTTTATGC CCTGAGAGCT CGTTGCCCTC GTGGACTTGA TGAGCTCCGC TTTCGCACGA GGCAGAGCAG AGGAGAGCAG CGGAGAGCAG TGCAGGAGTT TGCAGACGAG GGAGGCTGAA GAGTGTGGGG TGAAGATGCC GACCCCGAAA GGAAAGGGCG AGAAAGGGCT CGTCGTTCAG ACTCATCTCA GCGCGTCGAT GTATGAAGAG AGCTTCGATT TGCTGAGCCC CTCGCGGGAC TTCTCGGGCC AGTACACGCC CATGTCCGAG CCCCGGTTCA CGACGTCGCA GTCCTTGCCG CGAGCGGAGG CGAAAGCCAT GCCGCCCAAT CGAACGCAGT CCTCTCGATT CGCCGACAGG AGGCTGTCTC CTGCTGCGTC CATGGCCAGG TCGCCCACCA TGACGACCAT TGGCGGGCCG AAGGCGGGCT TGCTCGACGC GCAGGCTCTC GAGGATGGGA ATCGCAACGT CGACCTCGCT TTCACCAATA TGGGATACGC GGAGGTGCCG GCCGAGAAGC CCCGCGAGCC TCCCGTCTAC GACATTCCCA ACAGCAAGAG CTTCAAAATG CGCAAGCTTA AGGAGCCGAG CTTGGAAGAC GAGTGGAACG ACATCGTAGC CGAGAAGAAA AATCGGTACA GGGATTGCTG CTGCTGTGTG TTCAGCTCCG CCATCGTGGT GCTCATCGCC GCTGGCATTG TCTTCACGAC TATGTATTTC ATCCTCAAGC CTAGTCCGCC CACCATTCAT GTGTTAAACT TGAACGTCAC CGATTTCCGG CTGTTGTCAT CGACGACGAC GGACGGTGAG CCGCTGGTCG AAGCCAGCAT GACTTGCGTG GTGAGGATCA CCAACCCCAA CAAGTTCTCG GTGTTTCATC ACAGGGCATT GAATGTGAGC TTGAATTACA AGAGCGAAGT CTTGGGCCTC ATTTTGGTGC CAGGCTTCAA GCAGTCGGAG AAAAATGTGA CCGATCTGTT CGTTACGGTG CCCAAGTCCG TGGCCAAGAT TACGGATCAG GTGGACGCCA TTAATTTGCT CCAGGAGGTG AACGAGTCTA ATGTGAGGCT GGAGGTCAGA GGTTCGGCCG AGGGACATTA CAGAATTTTG GGAATTAACG TGAAGAAGCT CGATGCTCCA TTGCTGTGCA AGCTCAGTGT GAAGCCGGAA AACGAGGATA GCGCCGCCCA AATCATTTCC AGTAGTTGCT TCAATCCTGC CTGATCGTTT CAAGCATCAC AAGGTTTCAG AATCAAAGTG CACATTCTAC AAGTAGTTGG TTAGGGTGTT GATGGAATTG GGTAGCGCTG CAAGACACCT ATCGAGCACT GGAGCATCTT GCATGGTAGA CTTACAAGGC GACACATAGG CATTCTATTT AAGTAGAATT TTTTTTTGGC GCGCCTGCAT GGAGACTAGT CCCATCTTCC CGCTTTCAGA ATAGGGTCAG TTCTAGAATA GAATCCGCAT GCTCGTCCAC GACATGGCAG GGTCGAGAGG AAATTTCAGC GAGGAACACA TTTTTCTTTG TACAGAGTGA CTGGCCGACT GAGTTGATCT CGAGTCCTCC CACGACTGCG ACGGTCTGCG GAATGTGTGA GAAGCAATAC AATCCTGAAA GAAAGGATTT CCATATCCAT TAATTTGCTG CTTTGCTTAT TCCGATATGT AAGTACATAT TTAACGTCAA ATTTCCCAAC TGTACATAAT AAAGCAATGG AACAAAGCCA TGGCTCCTC |
CDS |
| >Mp2g12370.1 ATGAGCTCCG CTTTCGCACG AGGCAGAGCA GAGGAGAGCA GCGGAGAGCA GTGCAGGAGT TTGCAGACGA GGGAGGCTGA AGAGTGTGGG GTGAAGATGC CGACCCCGAA AGGAAAGGGC GAGAAAGGGC TCGTCGTTCA GACTCATCTC AGCGCGTCGA TGTATGAAGA GAGCTTCGAT TTGCTGAGCC CCTCGCGGGA CTTCTCGGGC CAGTACACGC CCATGTCCGA GCCCCGGTTC ACGACGTCGC AGTCCTTGCC GCGAGCGGAG GCGAAAGCCA TGCCGCCCAA TCGAACGCAG TCCTCTCGAT TCGCCGACAG GAGGCTGTCT CCTGCTGCGT CCATGGCCAG GTCGCCCACC ATGACGACCA TTGGCGGGCC GAAGGCGGGC TTGCTCGACG CGCAGGCTCT CGAGGATGGG AATCGCAACG TCGACCTCGC TTTCACCAAT ATGGGATACG CGGAGGTGCC GGCCGAGAAG CCCCGCGAGC CTCCCGTCTA CGACATTCCC AACAGCAAGA GCTTCAAAAT GCGCAAGCTT AAGGAGCCGA GCTTGGAAGA CGAGTGGAAC GACATCGTAG CCGAGAAGAA AAATCGGTAC AGGGATTGCT GCTGCTGTGT GTTCAGCTCC GCCATCGTGG TGCTCATCGC CGCTGGCATT GTCTTCACGA CTATGTATTT CATCCTCAAG CCTAGTCCGC CCACCATTCA TGTGTTAAAC TTGAACGTCA CCGATTTCCG GCTGTTGTCA TCGACGACGA CGGACGGTGA GCCGCTGGTC GAAGCCAGCA TGACTTGCGT GGTGAGGATC ACCAACCCCA ACAAGTTCTC GGTGTTTCAT CACAGGGCAT TGAATGTGAG CTTGAATTAC AAGAGCGAAG TCTTGGGCCT CATTTTGGTG CCAGGCTTCA AGCAGTCGGA GAAAAATGTG ACCGATCTGT TCGTTACGGT GCCCAAGTCC GTGGCCAAGA TTACGGATCA GGTGGACGCC ATTAATTTGC TCCAGGAGGT GAACGAGTCT AATGTGAGGC TGGAGGTCAG AGGTTCGGCC GAGGGACATT ACAGAATTTT GGGAATTAAC GTGAAGAAGC TCGATGCTCC ATTGCTGTGC AAGCTCAGTG TGAAGCCGGA AAACGAGGAT AGCGCCGCCC AAATCATTTC CAGTAGTTGC TTCAATCCTG CCTGA |
Protein |
| >Mp2g12370.1 MSSAFARGRA EESSGEQCRS LQTREAEECG VKMPTPKGKG EKGLVVQTHL SASMYEESFD LLSPSRDFSG QYTPMSEPRF TTSQSLPRAE AKAMPPNRTQ SSRFADRRLS PAASMARSPT MTTIGGPKAG LLDAQALEDG NRNVDLAFTN MGYAEVPAEK PREPPVYDIP NSKSFKMRKL KEPSLEDEWN DIVAEKKNRY RDCCCCVFSS AIVVLIAAGI VFTTMYFILK PSPPTIHVLN LNVTDFRLLS STTTDGEPLV EASMTCVVRI TNPNKFSVFH HRALNVSLNY KSEVLGLILV PGFKQSEKNV TDLFVTVPKS VAKITDQVDA INLLQEVNES NVRLEVRGSA EGHYRILGIN VKKLDAPLLC KLSVKPENED SAAQIISSSC FNPA |