Mp2g15600



Description

Annotation

Database ID Description
Pfam PF00912 Transglycosylase
NCBIfam TIGR02074 PBP1A family penicillin-binding protein
Gene3D G3DSA:3.40.710.10 -
SUPERFAMILY SSF53955 Lysozyme-like
PANTHER PTHR32282 BINDING PROTEIN TRANSPEPTIDASE, PUTATIVE-RELATED
SUPERFAMILY SSF56601 beta-lactamase/transpeptidase-like
Pfam PF00905 Penicillin binding protein transpeptidase domain
Coils Coil Coil
Gene3D G3DSA:1.10.3810.10 -
KEGG K05366 penicillin-binding protein 1A [EC:2.4.1.129 3.4.16.4]
MapolyID Mapoly0082s0057 -
GO GO:0009252 peptidoglycan biosynthetic process
GO GO:0008658 penicillin binding
GO GO:0008955 peptidoglycan glycosyltransferase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpPBP Peptidoglycan biosynthesis Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp2g15600.1 chr2:17388499..17393252 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g15600 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g15600 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.