| Database | ID | Description |
|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. |
| Gene3D | G3DSA:2.130.10.10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| SUPERFAMILY | SSF50978 | WD40 repeat-like |
| SMART | SM00320 | WD40_4 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. |
| PANTHER | PTHR45389 | WD REPEAT-CONTAINING PROTEIN RUP1 |
| KOG | KOG0277 | Peroxisomal targeting signal type 2 receptor; N-term missing; [U] |
| KOG | KOG0640 | mRNA cleavage stimulating factor complex; subunit 1; N-term missing; C-term missing; [A] |
| MapolyID | Mapoly0094s0072 | - |
| GO | GO:0010224 | response to UV-B |
| GO | GO:0005515 | protein binding |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpRUP | UV-B signaling protein | Published |
WD40 repressor (Mapoly0094s0072) providing negative feedback on the UVB response. CRISPR rup1 mutants had increased flavone content and were UVB-hyposensitive (stunted/dark green under prolonged UVB).
2 core 0 peripheral
Sequences: |
Gene UTR + CDS + intron |
| >Mp2g18040.1 AAGAGGTGCA ACGTGGGCGT GCTCGGGCGT GGACGTGCGC GATGGCCCAC AGGCTCGCTC GTCGTAGGTG ATGAACGCTC GTCGCCGTCT ATCTACCGCG GGGCGAGGGG GCGAGGGCAA GGGGTTATTC TGGGAAGTAC CAGCGCGTCC GGCATCGGGC CTTTACAGGG CGACCACCGC TGGGGACCCA AATGCCGGTC TCGAGATCGT AGAATTCTGC ATCCTGCGGG TCGGATGCGC GGGCAATTGG TGCGGAGGTG CGTTCGGTCT TCTGATCTAG TTTGACAGGA TTCGGGCCCA TGTAGAGCGC AGATATCCTG GAGGGCAGCA GCCGGGGTGC ACTATAACTC GGGCGGAGAC TTGCGGCATG GCCGGCCCGA CAGACTCGAG AGTGGGAGGA TCAACGCCAG TGCGAATGTC GTCGTAGTTG AGGCGGTGCA GTTTCTCGAA AGTAGTGGAC TCCAGGTGTG GGACGCAGAA GCATTTCGTT CTCGAGGCAA TTATCCTGTA GCGAAGTATA TTTCCTCGGG GGAGTCCCAC AGGTGACGTT TTTGGGAAGC AGTAAGCGGC TCAGCCCACA TTCTGGGCCT GGACTCTCCC CGCTTTTCTG TGGCCCTCAT TTCTCTGAAC CTTCCCATCG TGAACTGGTG TATCGACCAC CTACGGAACG ACTTTTGGCC ACAGCGCGAT TGTGGAGCCT CGAGTAGTTA TGGATTGCAG GTGGAAACAG TTTCCTGTCT AAATGTCTCG GAGGATTTTA TAAGCAAGTC ACCGCTGTGA GATCTTCACG GAAACCAAGC CTTTATGCCG CAGGAGTTCG GTGATCGCCC GTGTACCCAT CCCAGCTCAT GAGCCCTCGG CGTGATGACA TGTTCGGGAG CTCGATTACC GCTTGATGAA AATGGTATGT GAAAATCCGC ACCTTGTAGG TCACCTAACA TCCATGGACA GACGATTCTT AGACAGGAGA CTTTCTTAAG TGCAGGAAGA ATCCATATTT TACACGGCCA TGTCATCGCG GCGGACGCCA GCCCACCGTA ATGGGCGAGC GCCTCGCTTG CGTCGCACTC ACACACCACT GCCTCCATCG GTCGGGGGGA GCACCTCGGG GTACTTCTCG GGAGTGTTCC CAGTCGACGT GTGTGAGCTT GAGTCATCTG CCGCCATTGC TAGTCACGCC TCATTTATTC TCGAGTTTTT CCCCGTATTA TAATGCTCGC ATTGTGGTCG TTCCAGTTTT TTGACGAATT TCTTCCTGTA TCGCGCAATG CTCATACTAG TGAGACTTAT GTGTTCAGTC TGTGTGGACA GGGAAGCGGA GATGCATGGG GTCGAGGGGA CATTCTGAGT GAGCGACCCA TGCAGCCAGC GGGGAGGTAC TCGACGAGGA ATACCTGGTT CAGTCTCCCG GAGTCGTGCA GATTCGTCGA CAGGAAGGGC ATGATAGTGC CCGTTTCGCC GAGCACGGGA CTCAGCTGTC AGACTGCCAA ACGCCCTTAC TCTCCCTGGT ACCTGGAGCC AGAACTGACC TCCAGCAGCA AGAGACCTCG AACAGGAGCC AGCTCGTGGA ACTTGGGTCG GGCCACCACT AGCTTATCGC TGGCTGCCTT CCCGTGCTCG ACGAGCCCGG CGGAAAATCC CCACCAGAAG CCATCCGAAT GCCTGGCCTC CGAGCTCGCG AGGAGCACGA GCTCGGATGC ACGTAGGGAC TGCGTAGATC TGCGGAGGTC GAAATGCGCT GAGACGAATG TTTCATCCAC CCTCGACAAA GTCGTCGCAA CCATGCCAAC GTCGCCGGAG CGAAGGAATC CCTCCGAAAG CTGGCAATTC CGAGTCGTGG CGTCCTCCCG ATGTAAGTCA CCTTCGCTCC TCGCCTCGGA CGTGATTGGA ACCATCGACT TCAACTCCGA TTGCGAGCTC TTCGCCACCG GAGGCCTGGC CAGGAAAATT AGAATATGTT CGTACGCGAA GATGACGAGC GACGAGGCGC TCGTGTCATC GGATGAGGAC GAGGATTTGT ACTCGGATGA AGATGACGAG GATCAGGTTG GCAGTAGGCA CTCCTCCTCC AGGCGGCGAG GACGGAAGAA TTCCGGGTTC TCTCTGGATC ATGGTGAATC TGCCGTGGGC GAGATTTGCA CGCCTGGCAA GCTGAGCAGC CTCAAATGGC GACCCGATGG CTCAGAGGTT ATAGGATGCG GAGATTACGA TGGTGTAGTG TCCGAATGGA GCATCGAGCA CAAGCACACA GTGAGCGAGT GGTACGAGCA CAGCGGGCAG AGAGTGTGGA GTTTAGATTA CAGCAAGCTG GCCCCGACAC TGTCCGCATC CGCATCGGGA GATGGAACCG TGCGCGTGTG GAAGCGAGGC TCGGAGAAAA GCGTTGTAGT GATCAGGCCC CCGAGTGGAA ACTCTGTTTG CTGCGCGGAG TTCAGTCCGG CGTCCGAGTA TCTGATCGCC ATGGCGTCGG CGGATTGTAA TGTATATTTG TACGATCTTA GAAAGTCCGG CTCTCCTCTT TTGAAGCTGT CGAGCCATGA GAAAGCCGTA AGTTACGTGC GATTCCTCGG CAAAGATAAA ATAGTGTCGG CCTCGATCGA CAGCACATTG AAGTTGTGGG ATGTATCCTC CCCATTGGCA TTTGCAGCAC ACGATAAAGA AGGCGATAGC GGGATGATCA GTCCCGATGG ACACCTAGAG AGGACGTTTA GAGATCATTT AAATGTCAAA AATTTTGTTG GTTTGTCTGT ACATAGAGGG GCCGGCATTC TTGCCTGTGG ATCGGAAACG AATGAGGTTC TCATCTACAA AAGCTCGAGC ACCATACCTC TCCAACGGCA TAAGCTTCCA GGAAATTGCT GCCCAGGCTC AGACCTGAGC ACGAGCGGAA GTCCATTCGT CGGAGCCGTC TGCTGGAGAG AGAAAGGGAA TAACTACTCG ATGGTCGCCG CGAATTCTGA CGGTGTAGTC CAAGTGCTCC AGGCACACCA AGTAGATTCT ATTTGAGATT GTTTTGATGA TATTGACGTT CAATTCTCAT GTAGGAGCTA TCCGGCCTCG GACTATTTAT TCGAGGTCGG ACTTTGTCTC CTTGCTTACA CTGTTTTTTT AAAAGCAAAT TTAGAGGTTC GCATTGGCTC CGAATCTCTT GACCCTGTGA AGGTTTCGAC CACATCATGG GCTGTCAATG TAACTGTAGT AGCCTCGCGA AGGTTCAATT TAATAATTTC ACAGTTCTCT GT |
mRNA UTR + CDS |
| >Mp2g18040.1 AAGAGGTGCA ACGTGGGCGT GCTCGGGCGT GGACGTGCGC GATGGCCCAC AGGCTCGCTC GTCGTAGGTG ATGAACGCTC GTCGCCGTCT ATCTACCGCG GGGCGAGGGG GCGAGGGCAA GGGGTTATTC TGGGAAGTAC CAGCGCGTCC GGCATCGGGC CTTTACAGGG CGACCACCGC TGGGGACCCA AATGCCGGTC TCGAGATCGT AGAATTCTGC ATCCTGCGGG TCGGATGCGC GGGCAATTGG TGCGGAGGTG CGTTCGGTCT TCTGATCTAG TTTGACAGGA TTCGGGCCCA TGTAGAGCGC AGATATCCTG GAGGGCAGCA GCCGGGGTGC ACTATAACTC GGGCGGAGAC TTGCGGCATG GCCGGCCCGA CAGACTCGAG AGTGGGAGGA TCAACGCCAG TGCGAATGTC GTCGTAGTTG AGGCGGTGCA GTTTCTCGAA AGTAGTGGAC TCCAGGTGTG GGACGCAGAA GCATTTCGTT CTCGAGGCAA TTATCCTGTA GCGAAGTATA TTTCCTCGGG GGAGTCCCAC AGGTGACGTT TTTGGGAAGC AGTAAGCGGC TCAGCCCACA TTCTGGGCCT GGACTCTCCC CGCTTTTCTG TGGCCCTCAT TTCTCTGAAC CTTCCCATCG TGAACTGGTG TATCGACCAC CTACGGAACG ACTTTTGGCC ACAGCGCGAT TGTGGAGCCT CGAGTAGTTA TGGATTGCAG GTGGAAACAG TTTCCTGTCT AAATGTCTCG GAGGATTTTA TAAGCAAGTC ACCGCTGTGA GATCTTCACG GAAACCAAGC CTTTATGCCG CAGGAGTTCG GTGATCGCCC GTGTACCCAT CCCAGCTCAT GAGCCCTCGG CGTGATGACA TGTTCGGGAG CTCGATTACC GCTTGATGAA AATGGGAAGC GGAGATGCAT GGGGTCGAGG GGACATTCTG AGTGAGCGAC CCATGCAGCC AGCGGGGAGG TACTCGACGA GGAATACCTG GTTCAGTCTC CCGGAGTCGT GCAGATTCGT CGACAGGAAG GGCATGATAG TGCCCGTTTC GCCGAGCACG GGACTCAGCT GTCAGACTGC CAAACGCCCT TACTCTCCCT GGTACCTGGA GCCAGAACTG ACCTCCAGCA GCAAGAGACC TCGAACAGGA GCCAGCTCGT GGAACTTGGG TCGGGCCACC ACTAGCTTAT CGCTGGCTGC CTTCCCGTGC TCGACGAGCC CGGCGGAAAA TCCCCACCAG AAGCCATCCG AATGCCTGGC CTCCGAGCTC GCGAGGAGCA CGAGCTCGGA TGCACGTAGG GACTGCGTAG ATCTGCGGAG GTCGAAATGC GCTGAGACGA ATGTTTCATC CACCCTCGAC AAAGTCGTCG CAACCATGCC AACGTCGCCG GAGCGAAGGA ATCCCTCCGA AAGCTGGCAA TTCCGAGTCG TGGCGTCCTC CCGATGTAAG TCACCTTCGC TCCTCGCCTC GGACGTGATT GGAACCATCG ACTTCAACTC CGATTGCGAG CTCTTCGCCA CCGGAGGCCT GGCCAGGAAA ATTAGAATAT GTTCGTACGC GAAGATGACG AGCGACGAGG CGCTCGTGTC ATCGGATGAG GACGAGGATT TGTACTCGGA TGAAGATGAC GAGGATCAGG TTGGCAGTAG GCACTCCTCC TCCAGGCGGC GAGGACGGAA GAATTCCGGG TTCTCTCTGG ATCATGGTGA ATCTGCCGTG GGCGAGATTT GCACGCCTGG CAAGCTGAGC AGCCTCAAAT GGCGACCCGA TGGCTCAGAG GTTATAGGAT GCGGAGATTA CGATGGTGTA GTGTCCGAAT GGAGCATCGA GCACAAGCAC ACAGTGAGCG AGTGGTACGA GCACAGCGGG CAGAGAGTGT GGAGTTTAGA TTACAGCAAG CTGGCCCCGA CACTGTCCGC ATCCGCATCG GGAGATGGAA CCGTGCGCGT GTGGAAGCGA GGCTCGGAGA AAAGCGTTGT AGTGATCAGG CCCCCGAGTG GAAACTCTGT TTGCTGCGCG GAGTTCAGTC CGGCGTCCGA GTATCTGATC GCCATGGCGT CGGCGGATTG TAATGTATAT TTGTACGATC TTAGAAAGTC CGGCTCTCCT CTTTTGAAGC TGTCGAGCCA TGAGAAAGCC GTAAGTTACG TGCGATTCCT CGGCAAAGAT AAAATAGTGT CGGCCTCGAT CGACAGCACA TTGAAGTTGT GGGATGTATC CTCCCCATTG GCATTTGCAG CACACGATAA AGAAGGCGAT AGCGGGATGA TCAGTCCCGA TGGACACCTA GAGAGGACGT TTAGAGATCA TTTAAATGTC AAAAATTTTG TTGGTTTGTC TGTACATAGA GGGGCCGGCA TTCTTGCCTG TGGATCGGAA ACGAATGAGG TTCTCATCTA CAAAAGCTCG AGCACCATAC CTCTCCAACG GCATAAGCTT CCAGGAAATT GCTGCCCAGG CTCAGACCTG AGCACGAGCG GAAGTCCATT CGTCGGAGCC GTCTGCTGGA GAGAGAAAGG GAATAACTAC TCGATGGTCG CCGCGAATTC TGACGGTGTA GTCCAAGTGC TCCAGGCACA CCAAGTAGAT TCTATTTGAG ATTGTTTTGA TGATATTGAC GTTCAATTCT CATGTAGGAG CTATCCGGCC TCGGACTATT TATTCGAGGT CGGACTTTGT CTCCTTGCTT ACACTGTTTT TTTAAAAGCA AATTTAGAGG TTCGCATTGG CTCCGAATCT CTTGACCCTG TGAAGGTTTC GACCACATCA TGGGCTGTCA ATGTAACTGT AGTAGCCTCG CGAAGGTTCA ATTTAATAAT TTCACAGTTC TCTGT |
CDS |
| >Mp2g18040.1 ATGAAAATGG GAAGCGGAGA TGCATGGGGT CGAGGGGACA TTCTGAGTGA GCGACCCATG CAGCCAGCGG GGAGGTACTC GACGAGGAAT ACCTGGTTCA GTCTCCCGGA GTCGTGCAGA TTCGTCGACA GGAAGGGCAT GATAGTGCCC GTTTCGCCGA GCACGGGACT CAGCTGTCAG ACTGCCAAAC GCCCTTACTC TCCCTGGTAC CTGGAGCCAG AACTGACCTC CAGCAGCAAG AGACCTCGAA CAGGAGCCAG CTCGTGGAAC TTGGGTCGGG CCACCACTAG CTTATCGCTG GCTGCCTTCC CGTGCTCGAC GAGCCCGGCG GAAAATCCCC ACCAGAAGCC ATCCGAATGC CTGGCCTCCG AGCTCGCGAG GAGCACGAGC TCGGATGCAC GTAGGGACTG CGTAGATCTG CGGAGGTCGA AATGCGCTGA GACGAATGTT TCATCCACCC TCGACAAAGT CGTCGCAACC ATGCCAACGT CGCCGGAGCG AAGGAATCCC TCCGAAAGCT GGCAATTCCG AGTCGTGGCG TCCTCCCGAT GTAAGTCACC TTCGCTCCTC GCCTCGGACG TGATTGGAAC CATCGACTTC AACTCCGATT GCGAGCTCTT CGCCACCGGA GGCCTGGCCA GGAAAATTAG AATATGTTCG TACGCGAAGA TGACGAGCGA CGAGGCGCTC GTGTCATCGG ATGAGGACGA GGATTTGTAC TCGGATGAAG ATGACGAGGA TCAGGTTGGC AGTAGGCACT CCTCCTCCAG GCGGCGAGGA CGGAAGAATT CCGGGTTCTC TCTGGATCAT GGTGAATCTG CCGTGGGCGA GATTTGCACG CCTGGCAAGC TGAGCAGCCT CAAATGGCGA CCCGATGGCT CAGAGGTTAT AGGATGCGGA GATTACGATG GTGTAGTGTC CGAATGGAGC ATCGAGCACA AGCACACAGT GAGCGAGTGG TACGAGCACA GCGGGCAGAG AGTGTGGAGT TTAGATTACA GCAAGCTGGC CCCGACACTG TCCGCATCCG CATCGGGAGA TGGAACCGTG CGCGTGTGGA AGCGAGGCTC GGAGAAAAGC GTTGTAGTGA TCAGGCCCCC GAGTGGAAAC TCTGTTTGCT GCGCGGAGTT CAGTCCGGCG TCCGAGTATC TGATCGCCAT GGCGTCGGCG GATTGTAATG TATATTTGTA CGATCTTAGA AAGTCCGGCT CTCCTCTTTT GAAGCTGTCG AGCCATGAGA AAGCCGTAAG TTACGTGCGA TTCCTCGGCA AAGATAAAAT AGTGTCGGCC TCGATCGACA GCACATTGAA GTTGTGGGAT GTATCCTCCC CATTGGCATT TGCAGCACAC GATAAAGAAG GCGATAGCGG GATGATCAGT CCCGATGGAC ACCTAGAGAG GACGTTTAGA GATCATTTAA ATGTCAAAAA TTTTGTTGGT TTGTCTGTAC ATAGAGGGGC CGGCATTCTT GCCTGTGGAT CGGAAACGAA TGAGGTTCTC ATCTACAAAA GCTCGAGCAC CATACCTCTC CAACGGCATA AGCTTCCAGG AAATTGCTGC CCAGGCTCAG ACCTGAGCAC GAGCGGAAGT CCATTCGTCG GAGCCGTCTG CTGGAGAGAG AAAGGGAATA ACTACTCGAT GGTCGCCGCG AATTCTGACG GTGTAGTCCA AGTGCTCCAG GCACACCAAG TAGATTCTAT TTGA |
Protein |
| >Mp2g18040.1 MKMGSGDAWG RGDILSERPM QPAGRYSTRN TWFSLPESCR FVDRKGMIVP VSPSTGLSCQ TAKRPYSPWY LEPELTSSSK RPRTGASSWN LGRATTSLSL AAFPCSTSPA ENPHQKPSEC LASELARSTS SDARRDCVDL RRSKCAETNV SSTLDKVVAT MPTSPERRNP SESWQFRVVA SSRCKSPSLL ASDVIGTIDF NSDCELFATG GLARKIRICS YAKMTSDEAL VSSDEDEDLY SDEDDEDQVG SRHSSSRRRG RKNSGFSLDH GESAVGEICT PGKLSSLKWR PDGSEVIGCG DYDGVVSEWS IEHKHTVSEW YEHSGQRVWS LDYSKLAPTL SASASGDGTV RVWKRGSEKS VVVIRPPSGN SVCCAEFSPA SEYLIAMASA DCNVYLYDLR KSGSPLLKLS SHEKAVSYVR FLGKDKIVSA SIDSTLKLWD VSSPLAFAAH DKEGDSGMIS PDGHLERTFR DHLNVKNFVG LSVHRGAGIL ACGSETNEVL IYKSSSTIPL QRHKLPGNCC PGSDLSTSGS PFVGAVCWRE KGNNYSMVAA NSDGVVQVLQ AHQVDSI |