Mp2g20050



Description

Annotation

Database ID Description
PANTHER PTHR23024 ARYLACETAMIDE DEACETYLASE
SUPERFAMILY SSF53474 alpha/beta-Hydrolases
Pfam PF07859 alpha/beta hydrolase fold
Gene3D G3DSA:3.40.50.1820 alpha/beta hydrolase
KOG KOG1515 Arylacetamide deacetylase; [V]
MapolyID Mapoly0055s0044 -
GO GO:0016787 hydrolase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpGID1L7 putative class I carboxyesterase Published

Transcript models

Transcript ID Location Sequences Extract region
Mp2g20050.1 chr2:24134549..24137157 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g20050.2 chr2:24134549..24137157 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g20050 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g20050 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.