Mp2g21150



Description

Annotation

Database ID Description
FunFam G3DSA:1.10.8.80:FF:000001 Mg-protoporphyrin IX chelatase
CDD cd00009 AAA
Pfam PF01078 Magnesium chelatase, subunit ChlI
Pfam PF17863 AAA lid domain
SMART SM00382 AAA_5
Gene3D G3DSA:3.40.50.300 -
FunFam G3DSA:3.40.50.300:FF:000601 Mg-protoporphyrin IX chelatase
MobiDBLite mobidb-lite consensus disorder prediction
NCBIfam TIGR02030 magnesium chelatase ATPase subunit I
Gene3D G3DSA:1.10.8.80 -
PANTHER PTHR32039 MAGNESIUM-CHELATASE SUBUNIT CHLI
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
KEGG K03405 magnesium chelatase subunit I [EC:6.6.1.1]
MapolyID Mapoly0040s0099 -
GO GO:0005524 ATP binding
GO GO:0009570 chloroplast stroma
GO GO:0016887 ATP hydrolysis activity
GO GO:0015995 chlorophyll biosynthetic process
GO GO:0016851 magnesium chelatase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpCHLI1/2-like GUN genes Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp2g21150.1 chr2:25900069..25903179 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g21150 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g21150 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.