Mp2g23150



Description

Annotation

Database ID Description
PRINTS PR00503 Bromodomain signature
ProSiteProfiles PS50014 Bromodomain profile.
Pfam PF00439 Bromodomain
SMART SM00297 bromo_6
PANTHER PTHR15398 BROMODOMAIN-CONTAINING PROTEIN 8
Gene3D G3DSA:1.20.920.10 -
SUPERFAMILY SSF47370 Bromodomain
KOG KOG1474 Transcription initiation factor TFIID, subunit BDF1 and related bromodomain proteins; N-term missing; C-term missing; [K]
MapolyID Mapoly0072s0016 -
GO GO:0035267 NuA4 histone acetyltransferase complex
GO GO:0016573 obsolete histone acetylation
GO GO:0005515 protein binding

Nomenclature

Gene symbol Product Transcript ID Status
MpBromo6 Chromatin related protein Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp2g23150.1 chr2:27850332..27859770 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g23150.2 chr2:27850332..27859770 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g23150 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g23150 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.