Mp2g24470



Description

Annotation

Database ID Description
SMART SM00205 tha2
ProSiteProfiles PS51367 Thaumatin family profile.
PANTHER PTHR31013 THAUMATIN FAMILY PROTEIN-RELATED
PRINTS PR00347 Pathogenesis-related protein signature
PIRSF PIRSF002703 PR5
SUPERFAMILY SSF49870 Osmotin, thaumatin-like protein
Gene3D G3DSA:2.60.110.10 Thaumatin
Pfam PF00314 Thaumatin family
MapolyID Mapoly0069s0095 -

Nomenclature

Gene symbol Product Transcript ID Status
MpPR5b Pathogen related Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp2g24470.1 chr2:29506179..29511101 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g24470 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g24470 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.