Mp2g25840



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00717 sant
Coils Coil Coil
CDD cd00167 SANT
SUPERFAMILY SSF46689 Homeodomain-like
PANTHER PTHR46872 DNA BINDING PROTEIN
MapolyID Mapoly0025s0094 -

Nomenclature

Gene symbol Product Transcript ID Status
MpMYBL1 transcription factor, MYB-related Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp2g25840.1 chr2:31682798..31699544 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g25840 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g25840 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.