Mp3g01000
Description
Annotation
| Database | ID | Description |
|---|---|---|
| SMART | SM00656 | amb_all |
| Gene3D | G3DSA:2.160.20.10 | - |
| SUPERFAMILY | SSF51126 | Pectin lyase-like |
| PANTHER | PTHR31683 | PECTATE LYASE 18-RELATED |
| PRINTS | PR00807 | Pollen allergen Amb family signature |
| Pfam | PF00544 | Pectate lyase |
| KEGG | K01728 | pectate lyase [EC:4.2.2.2] |
| MapolyID | Mapoly0007s0096 | - |
| GO | GO:0030570 | pectate lyase activity |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpPL1.3 | Cell wall related protein | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp3g01000 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp3g01000.1 AGCTCTCCTC AGCTCACAGA TGATCTCACC ACACTCGATC CCCTAGCACC AGTCCCCTCG TCCCGCCCCT CGCATTCAAC TCCCGGACTC GCTCTCTCTC TCAAGAACTC GCAATGGGTG CGTTCGCGGC TCTGAGAGCG TTGGTGGTGT GCTGTATTAT AGCCAGTGCG GGCGCAATTC CTCTCCTCGG GTAAGAACAC ACAGCACCAA CTCACTCGAC GGCGTGAGTG GTCCGCTGAG TAGCAAACGC ACATCTGTTG TACAATGCAT CGTGGAAATT TAGTGTCTCA GATATTCTCC TCCCTTGCGC TGAAATCTCC AATACCGTTC AGCGCTGCAC TAGATCACTC CGGCGTGCAT CGAATGCTCC CTTCTCTTCT CTCTGGTCGA GTTCTACTCG ACCTCTGTTT CTGCATTACT CCCTTTCTCT CATATTATTC CTCTGGTCAG TAAGAGTCAA ATCATGTCTC AGTATTGATA GCGAGTCCAG CCATCTCGTT TGCTCAGACA GTATTCTCCA TTACGTGCCG TATCTGCCAC CCCTCATCTC GCACCAGCAG CATTCATTCT CGTGTGTAGC CACTTCCTTC CCCTGCCAGA AAAATTGTTG TTGTCAAGTA ATATCACGTA CTACTCTCGG TAGCTATGAA CTTCTCGTGG CGAGTGGTCG AATCGGGTCA TTAACTGGCC GTTGATATAT GCTTGAGTTT ACGGGTCAAG GGGCAGCTGT TGTCGTAGTC TGACGAGTCT GCTTCGTATA TTATTGAGAC AGCGACCTCT CTCAGACTGG GCGGAAGTAA GAAGTCGATA GAAAACAGCA TTGTTCCATT GGACGGTCTC ACTGATTCGG TGTTATTATT TCTTGGTCTC CAGGGGCCCG CTTGGAAATT TGACGAACAG CATTCACAGG CGGGAGCTGA GGAGCAAGAA GTCGAAGACG CCAGCAGTGT CTGCCAAAAG GAAGTTGGCA GGATGCAGCA GCGGGAATCC CATCGACAGC TGCTGGATGT GCGACCCGGA CTGGATGAGC CATCGCCAGA GGCTCGCGGA CTGCGCAATT GGTTTCGGGC ACCAAGCGGC CGGAGGACGC AGCGGAGAAA TATACACAGT GACGGACGCA GGTAACGACG ACCCCGAGGA GCCCAAGTAC GGAACTCTGC GATGGGGAGT CATCCAATCG AAGCCGCTGT GGATCATCTT CAAGCAAGAC ATGACGATAC AGCTCAAGGA GGAACTCATC GTCACCAGCT TCAAGACTCT GGACGGGCGT GGAGCTAATG TCCACATTGC CAACGGCGCG TGCATCACCA TCCAGGGGGT GACGAATGTC ATCGTGCACG GCTTGCACAT TCACGACTGC AAGTCCACGG GACCCGCTCG AATTCGGAGC TCCGAGTCGC ACATCGGGGA CCGAGGAAAG ACGGACGGCG ACGCCATCAG CATTTTCGAG TCGACCGACA TCTGGATTGA CCACAATTCC TTCTCCAACT GCGCCGACGG CCTCGTCGAC GTCATCCAAG GCTCGGACGC TGTAACCATA TCCAACAACG AATTCAAAGA CCACGACAAA GTCATGCTCC TCGGAGCCCA CGACAGCGAC TACCGCGACA AGAACATGAA GGCCACCGTT TGCTTCAACA AATTCGGCCC TGGACTGATC CAGCGCATGC CTAGGTACGG ACGGCCCTTT TCCTCTCTGC CTAAAAATCT CTCTGTACAA TCTTCAGCTT GCGCTCACTT GTATTTCTCA CCGCTGCCCC TCGCACGTCT CTTCTAACGC CTGCTGCCCT GTCCTGGACT CAGATGTCGA TTGGGAAACT TCCATATCTT CAACAACTAC TACATTTCGT GGGAAATGTA TGCCATCGGT GGGAGCGGAC AGCCTACCAT TAACAGCGAG GGCAACTACT TCGATGCTGG TGGCGTGAAG GAGGTGAGCT TGTGTTCTTC TGCCTACTCT GTCCCTTGGC AGCGCATTTG TTTGTTATGT CTGTTACGTT TATTGACGAG GTTCATTATT CCAATGCTTA CCGGGAGTTG GTTCGTTGCT CAGGTGACGA AGCATTTGGA AGATGGCGGT GACTACCGAT CGAATGGAGA CATTTTCTTG AACGGCGCAT ACTTCACCCC AAGTGGGGCT TCGACCAGCT CTCCGCTGTA CGCCAGGGCC AGGAGTTATT CGGCACTGCC TGCGTCTCAG GTGCCTCGAA TCGTCTCAGC AGGACCCACG AGCTAGGCAC CGCTGCGGAG TGCTGTTCGA GGCGCCAACA GACGATCATG CCATCTCGTT TCGTCCAGTG TACCGCGAGA CACCGCCACC GACTCCGATG GGGGGTCGTC CTCGCTCTGC TGTACGGGTT GCGTCCAGAG GACAGTTTCC GTTGGGTTCG TTCGTTCGAT GTACTACAGA GAAGCCATGC TCACGGATCA ATCTTCATGA AAGGGTGAAG AGGGTCTGCG AGTTATAATT TAGTGGGCTC TTTCCAAATG GAAGAGAGCT CGAATAGCGT GTATAGTGAT TAACAGTGAA GACATGGCTT CAAGAAGATC ACACCAGAGC TGTTGCTAAC CACGGCCGGG TGCATCGCTT GACCATTGTC TCAGAATCGC CTGCCTTCTA ATCTTTTAGA ATATTAGGAG CTTGGCATTG CAACCTGTCA TCCAGAAGGC CCGGTTTAAA GGCTGTGGAT GTATAAGAGT TGTTAGACAA CGTCTGTTGT ACAAATAGGG TTTCAAAGCG CGGTGTTAGT TCTCTTGCAC ACAAATGCGC GAGAGGATGA ATGCCTACTG CGCCAATTTA ATAAGTTTTG AAAAGAAATT TCGATCGAAA |
mRNA UTR + CDS |
| >Mp3g01000.1 AGCTCTCCTC AGCTCACAGA TGATCTCACC ACACTCGATC CCCTAGCACC AGTCCCCTCG TCCCGCCCCT CGCATTCAAC TCCCGGACTC GCTCTCTCTC TCAAGAACTC GCAATGGGTG CGTTCGCGGC TCTGAGAGCG TTGGTGGTGT GCTGTATTAT AGCCAGTGCG GGCGCAATTC CTCTCCTCGG GGGCCCGCTT GGAAATTTGA CGAACAGCAT TCACAGGCGG GAGCTGAGGA GCAAGAAGTC GAAGACGCCA GCAGTGTCTG CCAAAAGGAA GTTGGCAGGA TGCAGCAGCG GGAATCCCAT CGACAGCTGC TGGATGTGCG ACCCGGACTG GATGAGCCAT CGCCAGAGGC TCGCGGACTG CGCAATTGGT TTCGGGCACC AAGCGGCCGG AGGACGCAGC GGAGAAATAT ACACAGTGAC GGACGCAGGT AACGACGACC CCGAGGAGCC CAAGTACGGA ACTCTGCGAT GGGGAGTCAT CCAATCGAAG CCGCTGTGGA TCATCTTCAA GCAAGACATG ACGATACAGC TCAAGGAGGA ACTCATCGTC ACCAGCTTCA AGACTCTGGA CGGGCGTGGA GCTAATGTCC ACATTGCCAA CGGCGCGTGC ATCACCATCC AGGGGGTGAC GAATGTCATC GTGCACGGCT TGCACATTCA CGACTGCAAG TCCACGGGAC CCGCTCGAAT TCGGAGCTCC GAGTCGCACA TCGGGGACCG AGGAAAGACG GACGGCGACG CCATCAGCAT TTTCGAGTCG ACCGACATCT GGATTGACCA CAATTCCTTC TCCAACTGCG CCGACGGCCT CGTCGACGTC ATCCAAGGCT CGGACGCTGT AACCATATCC AACAACGAAT TCAAAGACCA CGACAAAGTC ATGCTCCTCG GAGCCCACGA CAGCGACTAC CGCGACAAGA ACATGAAGGC CACCGTTTGC TTCAACAAAT TCGGCCCTGG ACTGATCCAG CGCATGCCTA GATGTCGATT GGGAAACTTC CATATCTTCA ACAACTACTA CATTTCGTGG GAAATGTATG CCATCGGTGG GAGCGGACAG CCTACCATTA ACAGCGAGGG CAACTACTTC GATGCTGGTG GCGTGAAGGA GGTGACGAAG CATTTGGAAG ATGGCGGTGA CTACCGATCG AATGGAGACA TTTTCTTGAA CGGCGCATAC TTCACCCCAA GTGGGGCTTC GACCAGCTCT CCGCTGTACG CCAGGGCCAG GAGTTATTCG GCACTGCCTG CGTCTCAGGT GCCTCGAATC GTCTCAGCAG GACCCACGAG CTAGGCACCG CTGCGGAGTG CTGTTCGAGG CGCCAACAGA CGATCATGCC ATCTCGTTTC GTCCAGTGTA CCGCGAGACA CCGCCACCGA CTCCGATGGG GGGTCGTCCT CGCTCTGCTG TACGGGTTGC GTCCAGAGGA CAGTTTCCGT TGGGTTCGTT CGTTCGATGT ACTACAGAGA AGCCATGCTC ACGGATCAAT CTTCATGAAA GGGTGAAGAG GGTCTGCGAG TTATAATTTA GTGGGCTCTT TCCAAATGGA AGAGAGCTCG AATAGCGTGT ATAGTGATTA ACAGTGAAGA CATGGCTTCA AGAAGATCAC ACCAGAGCTG TTGCTAACCA CGGCCGGGTG CATCGCTTGA CCATTGTCTC AGAATCGCCT GCCTTCTAAT CTTTTAGAAT ATTAGGAGCT TGGCATTGCA ACCTGTCATC CAGAAGGCCC GGTTTAAAGG CTGTGGATGT ATAAGAGTTG TTAGACAACG TCTGTTGTAC AAATAGGGTT TCAAAGCGCG GTGTTAGTTC TCTTGCACAC AAATGCGCGA GAGGATGAAT GCCTACTGCG CCAATTTAAT AAGTTTTGAA AAGAAATTTC GATCGAAA |
CDS |
| >Mp3g01000.1 ATGGGTGCGT TCGCGGCTCT GAGAGCGTTG GTGGTGTGCT GTATTATAGC CAGTGCGGGC GCAATTCCTC TCCTCGGGGG CCCGCTTGGA AATTTGACGA ACAGCATTCA CAGGCGGGAG CTGAGGAGCA AGAAGTCGAA GACGCCAGCA GTGTCTGCCA AAAGGAAGTT GGCAGGATGC AGCAGCGGGA ATCCCATCGA CAGCTGCTGG ATGTGCGACC CGGACTGGAT GAGCCATCGC CAGAGGCTCG CGGACTGCGC AATTGGTTTC GGGCACCAAG CGGCCGGAGG ACGCAGCGGA GAAATATACA CAGTGACGGA CGCAGGTAAC GACGACCCCG AGGAGCCCAA GTACGGAACT CTGCGATGGG GAGTCATCCA ATCGAAGCCG CTGTGGATCA TCTTCAAGCA AGACATGACG ATACAGCTCA AGGAGGAACT CATCGTCACC AGCTTCAAGA CTCTGGACGG GCGTGGAGCT AATGTCCACA TTGCCAACGG CGCGTGCATC ACCATCCAGG GGGTGACGAA TGTCATCGTG CACGGCTTGC ACATTCACGA CTGCAAGTCC ACGGGACCCG CTCGAATTCG GAGCTCCGAG TCGCACATCG GGGACCGAGG AAAGACGGAC GGCGACGCCA TCAGCATTTT CGAGTCGACC GACATCTGGA TTGACCACAA TTCCTTCTCC AACTGCGCCG ACGGCCTCGT CGACGTCATC CAAGGCTCGG ACGCTGTAAC CATATCCAAC AACGAATTCA AAGACCACGA CAAAGTCATG CTCCTCGGAG CCCACGACAG CGACTACCGC GACAAGAACA TGAAGGCCAC CGTTTGCTTC AACAAATTCG GCCCTGGACT GATCCAGCGC ATGCCTAGAT GTCGATTGGG AAACTTCCAT ATCTTCAACA ACTACTACAT TTCGTGGGAA ATGTATGCCA TCGGTGGGAG CGGACAGCCT ACCATTAACA GCGAGGGCAA CTACTTCGAT GCTGGTGGCG TGAAGGAGGT GACGAAGCAT TTGGAAGATG GCGGTGACTA CCGATCGAAT GGAGACATTT TCTTGAACGG CGCATACTTC ACCCCAAGTG GGGCTTCGAC CAGCTCTCCG CTGTACGCCA GGGCCAGGAG TTATTCGGCA CTGCCTGCGT CTCAGGTGCC TCGAATCGTC TCAGCAGGAC CCACGAGCTA G |
Protein |
| >Mp3g01000.1 MGAFAALRAL VVCCIIASAG AIPLLGGPLG NLTNSIHRRE LRSKKSKTPA VSAKRKLAGC SSGNPIDSCW MCDPDWMSHR QRLADCAIGF GHQAAGGRSG EIYTVTDAGN DDPEEPKYGT LRWGVIQSKP LWIIFKQDMT IQLKEELIVT SFKTLDGRGA NVHIANGACI TIQGVTNVIV HGLHIHDCKS TGPARIRSSE SHIGDRGKTD GDAISIFEST DIWIDHNSFS NCADGLVDVI QGSDAVTISN NEFKDHDKVM LLGAHDSDYR DKNMKATVCF NKFGPGLIQR MPRCRLGNFH IFNNYYISWE MYAIGGSGQP TINSEGNYFD AGGVKEVTKH LEDGGDYRSN GDIFLNGAYF TPSGASTSSP LYARARSYSA LPASQVPRIV SAGPTS |