Mp3g06040



Description

Annotation

Database ID Description
ProSiteProfiles PS50255 Cytochrome b5 family, heme-binding domain profile.
PIRSF PIRSF015921 FA_sphingolip_des
SUPERFAMILY SSF55856 Cytochrome b5-like heme/steroid binding domain
Pfam PF00487 Fatty acid desaturase
CDD cd03506 Delta6-FADS-like
Gene3D G3DSA:3.10.120.10 -
SMART SM01117 Cyt_b5_2
PANTHER PTHR19353 FATTY ACID DESATURASE 2
Pfam PF00173 Cytochrome b5-like Heme/Steroid binding domain
KOG KOG4232 Delta 6-fatty acid desaturase/delta-8 sphingolipid desaturase; [I]
MapolyID Mapoly0006s0074 -
GO GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
GO GO:0006629 lipid metabolic process
GO GO:0016020 membrane
GO GO:0016491 oxidoreductase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpFAD4 Secondary metabolism enzyme Provisional
This is a provisional entry. If you want to update the entry, please contact the administrator.

Transcript models

Transcript ID Location Sequences Extract region
Mp3g06040.1 chr3:6419714..6423398 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp3g06040 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp3g06040 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.